| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1721 |
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| Symbol | |
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| ID | 4598483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1829796 |
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| End bp | 1832396 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639776320 |
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| Product | exonuclease V subunit alpha |
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| Protein accession | YP_922921 |
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| Protein GI | 119715956 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTTCT ACCGCGGCGC GGCGAAGGCG GCGCGCGCCT ACGTCGAGCG TGATCGCTCG
TGGGCCGATG ACTACTACCT CGCCGAGGGC ACCGGCGTCG CCGAGCGACT CACTGCGACC
TCGGATGGTG TCGCAAGTGC GGGCCTGATG GACGGCGACA CCTATGAGCA GTGGGTCGCC
GGGATCGACA TCGATACCGG GCGGAAGAAG GGCCGGGTCC GGGAGGACGC GAACGCGCTG
CGTTTCGTCG AGGTCACCGT CAACGGTCCG AAAACCTGGT CGCTGGCCGC CGCGCTGCAC
CCAGAACTCT CGATCGCGCT GGACGGAGCC CAGGAGAAGG CCGCCGCCGA GATCATCAGC
TGGGTCGCCC AGCGTGCGAC CACCCGGGTC GGTCCGCGTG GACGACAGGT GCAGGTGCCG
GTGGAGCGGA TCGAGGCGGC GGTGATCCGG CACTACACGT CGCGGGCCGG CGACCCGCAC
CGTCATCTGC ACCTTCAGGT CAACGCCCGC GTCTTCGCCG CCGGGGCGTG GCGGGGTCTG
CACTCGGTGG GTGTGCGCGA CATGATCGAG GCGATCAACG GGATCGGGCA TGCAGCGGTC
GCCACGAACC CGGCGTTTCG AGCGGTGCTG GCCGCACATG GCTTCACTTT GGACGCCGAG
ACAGGGGAGA TCGAGCAGCT CGCGTCCTAC GTCGGGGCGT TCAGCGCTCG GACCAGTCAG
ATCCACCGCA ACATCGACCG GTACGAAGCC GAGTGGCGGC GAGAGCATCC TGGTGAGGGG
CCGGGGCCGC GGCTGCGTGA GATGTGGGAT CGGCGGGCGT GGGCCGATGC GCGGCCGGAC
AAGGTCGTCC CCACGGATGG CGCTGACCTG GTTGCCAGGT GGAACGACGA GCTACGCGCC
CTGGGCTACC GCGACCCAGC TGCCCCAGCC GCACTCGAGG CAACCCAGAT CGCCTGGATC
GACCGGGACG GGGCGGCAGA CTGGGTGATC TCGCAGCTCG GATCGAAGCG CTCAGCATGG
AACATCGCGG ACGTTCGCGG CAAGGTCGAG GTCCTGCTGG CACAGACCAA TCTGGTCGCG
GAGTCCGCGG CACGCATCGA GCTTGCCGAG GACGTCACGG CTCGGGCCGC CGCTCGCTGT
ACGCCGCTGC TCACACGGTC GAACGTGCCC CAGCACGTCC GGGCCCTGAC CTCCCAGCAG
GTCCTCGCGG TCGAGGGCGA CATCGTGCGT CGCCTCGCCT GCCGCGCCGA GACTCCCGCA
AGGCGGGTCC GCCTTCAGGG GCGTGGGCTG ACGCGGGTCG ACCCCACCCA GGCGGCCGTC
GTGGGCACGC TGGCCGGCGA TGGCCCGCTG GTCGTCGTGG AGGGCGCGGC CGGCGCCGGC
AAGACCACCG CGCTGAGGTC GGCGCAGGCC ACGCTGGCTC GGCAGGGGCA TCGGCTGCTG
GTGGTGACGC CGACGTTGAA GGCGGCCGAG GTCGCCGCCG CGGAGACCGA CGCCGACGGG
CACTCGGCCG CCTGGCTGAT CCACCAGCAC GGCTGGCGCT GGGACGACGA CGGGCACTGG
GCACGCCGAC CCAACACCAC ACCCGACCCG GCCGCCCGGC TGAGACCCGG TGATCTGCTG
CTCATCGACG AGGCGGGCAT GCTGGACCAG GACACCGCCC GCGCGCTCTT GACGATCGCC
GACGAGGCCG GGGCGCGGGT CGCCCTGGTC GGCGACCGAC ACCAGCTACC CGCAGTCGGA
CGCGGCGGCG TACTCGACCA CGCGATCGCG TGGGCCAACC CCACCGCCGT CGTGTCGTTG
GAGAAGGTGC ACCGGTTCAC CGACCCCGAC TACGCGGCAC TCAGCCTGAC GATGCGCAAG
GGCGACAACC CGGAGGAGGT CTTCGACTCG CTCTACCGCC GCGGACAGGT CGTCATCCAT
CCCAGCGACA TCGAACGCGA CCTCGCGTTG AGCCAGGCCG GTGCCGCCGG TGACCTCGTC
GTTGCCGACA CTCGCGAGCA GGTCGCCCGC CTGAACGCCG CAATCCGTGA CCAGCGCCAA
GTCACGGCCG AGTCCACCGT CTCGATGACC ACGTCTCGCG GTGAACGGAT CGGGATTGGT
GACCGCGTGG CCACCCGCCG CAACGACCAC GACCTCGGGG TCGCGAACCG GCAGACCTGG
ACCGTCACCG GCCTCGGCGA GGACGGCAGC CTCACCGTCC GCGGACGAGG ACGTGACCGG
CTGCTCCCCG CGGAGTACGC GAACAGGTTC GTCGAGCTGG CCTACGCCAC CACCGTCCAC
GGGGCACAGG GAGAGACCGT CGATGCCGCG CACGTCGCCA TCGGGGACAC CACCGGGGCT
GCCGCGGCGT ACGTCGCAAT GACCCGCGGC CGGGAGCGCA ACACCGCGCA CCTGGTGGCC
GAGTCCGTCG AGGATGCCCG CAGGCAGTGG GTCGAGGTCT TCGCCCGCGA CCGTGCCGAC
CTCGGCCCGG CCCACGCGAA GCGGCAGGCG ATCGAGGCCA TCGACCGGTA CGGCAGCCAG
CAGCGCCGGA GGCCGGCGCA AGGGCCCGTC GAGGAACCGC CACGACCCGT CCCGTCCTCC
GGCAGCGGGA TCGGCCTGTG A
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| Protein sequence | MKFYRGAAKA ARAYVERDRS WADDYYLAEG TGVAERLTAT SDGVASAGLM DGDTYEQWVA
GIDIDTGRKK GRVREDANAL RFVEVTVNGP KTWSLAAALH PELSIALDGA QEKAAAEIIS
WVAQRATTRV GPRGRQVQVP VERIEAAVIR HYTSRAGDPH RHLHLQVNAR VFAAGAWRGL
HSVGVRDMIE AINGIGHAAV ATNPAFRAVL AAHGFTLDAE TGEIEQLASY VGAFSARTSQ
IHRNIDRYEA EWRREHPGEG PGPRLREMWD RRAWADARPD KVVPTDGADL VARWNDELRA
LGYRDPAAPA ALEATQIAWI DRDGAADWVI SQLGSKRSAW NIADVRGKVE VLLAQTNLVA
ESAARIELAE DVTARAAARC TPLLTRSNVP QHVRALTSQQ VLAVEGDIVR RLACRAETPA
RRVRLQGRGL TRVDPTQAAV VGTLAGDGPL VVVEGAAGAG KTTALRSAQA TLARQGHRLL
VVTPTLKAAE VAAAETDADG HSAAWLIHQH GWRWDDDGHW ARRPNTTPDP AARLRPGDLL
LIDEAGMLDQ DTARALLTIA DEAGARVALV GDRHQLPAVG RGGVLDHAIA WANPTAVVSL
EKVHRFTDPD YAALSLTMRK GDNPEEVFDS LYRRGQVVIH PSDIERDLAL SQAGAAGDLV
VADTREQVAR LNAAIRDQRQ VTAESTVSMT TSRGERIGIG DRVATRRNDH DLGVANRQTW
TVTGLGEDGS LTVRGRGRDR LLPAEYANRF VELAYATTVH GAQGETVDAA HVAIGDTTGA
AAAYVAMTRG RERNTAHLVA ESVEDARRQW VEVFARDRAD LGPAHAKRQA IEAIDRYGSQ
QRRRPAQGPV EEPPRPVPSS GSGIGL
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