Gene Noca_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1707 
Symbol 
ID4599746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1812314 
End bp1812592 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content69% 
IMG OID639776306 
Productanti-sigma factor 
Protein accessionYP_922907 
Protein GI119715942 
COG category 
COG ID 
TIGRFAM ID[TIGR02949] anti-sigma factor, TIGR02949 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.106573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCACG ACCACCGCCC AGAACCCAGC TCCGAGGACT GTGCGGACTT CCTCGAGCGG 
ATCGTGTACT TCCTGGACAA CGAGCTCGAC GAGGGCGACT GCTCCGCCGT GCGACTGCAC
CTGGACAGCT GCAACCCCTG CCTGGAGCGC TACGACCTCC AGCGCACGGT GAAGGCCGTG
GTGGCGCGCT CGTGCGCGGA GTCGGCCCCC GACGAGCTGC GCAAGCGGGT GCTGCTGCGG
ATCCGCGAGG TGCAGGTCCA GATCCGCGAG ACGCCCTAG
 
Protein sequence
MSHDHRPEPS SEDCADFLER IVYFLDNELD EGDCSAVRLH LDSCNPCLER YDLQRTVKAV 
VARSCAESAP DELRKRVLLR IREVQVQIRE TP