| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1702 |
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| Symbol | |
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| ID | 4599741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 1807710 |
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| End bp | 1809110 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 639776301 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_922902 |
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| Protein GI | 119715937 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0293007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCTTTT CCGGGGTGGC GCGTTGGTCG GATGTGGCCA GCCACGTCTC CACTCTCGAG
GGCCCCAGCG ACGGAGAGCT GATCTCCGCC GTCCGGGGCG GCGACACCGA CGCCTACGGT
GAGCTCTTCG CACGCCACGT CGAGGCTGCC CGGCGCCTGG CGCGGCAGCT CGTCCCCTCC
GGCGAGGTCG ACGATCTCGT CTCCGAGGCG TTCGCCAAGG TGCTGGTCGT GCTGCAGCGC
GGCGGCGGGC CGGACCTCGC CTTCCGCGCC TACCTCCTCA CGGCGGTACG CCGCCTCCAG
GTCGACCGGA TCCGGGCCAC GGCCCGGCTG CAGACCACCG GCGACCTCAC CCCGTTCGAC
CCCGGGGTGC CGTTCCGGGA CACGGCGGTC GAGGGCTTCG AGAGCGCCAC CGCTGCCCGC
GCGTTCGCGT CCCTGCCCGA GCGGTGGCAG CTGGTGCTCT GGCACACGGA GGTCGAGGAG
CAGAAGCCGG CGGAGGTCGC CCTGCTGCTG GGCATGAGCC CCAACTCGGT CTCCGCCCTC
GCCTACCGGG CCCGCGAGGG GCTGCGCCAG GCCTACCTGT CGATGCACAC CCAGGACGTC
GAGGACGACG CCTGCGCCCG GACCCGCGCC CAGCTCGGCG CCTACGTCCG CGGCGGCCTG
TCCCGCCGCG ACACGGCCCG GGTCGAGCAG CACCTCGAGG AGTGCCGGCG CTGCACGGCG
ATCTACCTCG AGCTCACGGA GGTCAACTCG GGGCTCGGGG CCCTGCTCGC CCCGCTGCTG
CTCGGCACCG CGGCCACGGC GTACGTCGGC GCCACCACCG GGGGGCTGTC CGCGGCCACC
GGCGGCGTCG CCGTGCTGAT CGGCCGCGCC CGCGACGCGG TGGTCAGCCA CGCCCCGACC
GCTGCGGTCG CCGGCGCCGC CGCGTCCGTC GTCGTCGCCG GGCTGGTCGT GGCCCTGCAG
CACGAGCCGG GCGGGCAGCC GGCGGCCGAG GACAACCCCG TGGTGACGGT GGCGCCCTCG
CTGACGGCCT CGGCCGGACC CGGCCTCCCG CTGGGCCGGC GGCCCGCCGG CCCCGGGGCC
GCGACCGGCA CCACGACGTC GGCGGAGGCC ACCGCCGGTC CGGGCCGGCC CACGCCGGCG
GCCGCCACCG AAGGGTCGGG ACCGACCGCC GGGCCGACCG GAGGCCCCAC CGACGGACCG
ACGAGTGGCC CCACCAGCGG ACCGACCGAG GAGCCTTCCG CACCGCCCTC GGCGCCGCCC
TCCGCGCCGC CTCAGTCACC CCTGGTGCAG CTCGGCGTCG AGGCATCGGC CGGCCCTGAC
GGTGCCTCGG TGCAGGTCAC CGGCGGCGTG GCGGGCGTGC CGCTGCCCAC GATCTCGGTC
GGGGTCCCGG TCGGTCCCTG A
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| Protein sequence | MIFSGVARWS DVASHVSTLE GPSDGELISA VRGGDTDAYG ELFARHVEAA RRLARQLVPS
GEVDDLVSEA FAKVLVVLQR GGGPDLAFRA YLLTAVRRLQ VDRIRATARL QTTGDLTPFD
PGVPFRDTAV EGFESATAAR AFASLPERWQ LVLWHTEVEE QKPAEVALLL GMSPNSVSAL
AYRAREGLRQ AYLSMHTQDV EDDACARTRA QLGAYVRGGL SRRDTARVEQ HLEECRRCTA
IYLELTEVNS GLGALLAPLL LGTAATAYVG ATTGGLSAAT GGVAVLIGRA RDAVVSHAPT
AAVAGAAASV VVAGLVVALQ HEPGGQPAAE DNPVVTVAPS LTASAGPGLP LGRRPAGPGA
ATGTTTSAEA TAGPGRPTPA AATEGSGPTA GPTGGPTDGP TSGPTSGPTE EPSAPPSAPP
SAPPQSPLVQ LGVEASAGPD GASVQVTGGV AGVPLPTISV GVPVGP
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