Gene Noca_1685 details

Gene Information

• Locus tag: Noca_1685
• ID: 4599724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 1791391
• End bp: 1793307
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639776284
• Product: peptidase S26B, signal peptidase
• Protein accession: YP_922885
• Protein GI: 119715920
• TIGRFAM ID: [TIGR02228] signal peptidase I, archaeal type

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.170419
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTCGAGC TCGATACCCG ACCGAGACGG CGCAGGTCCT GGCCGCGCCG CCTCTTCAGC 
CTGCTCCGGT GGGGATTCCT GCTCGCCGTC CTCGCGCTCA GCGTGCCCGG CCCGTTCGGC 
CCGGCCCGGC TGGGCGTCAC GGTCGTGTCC GGACCGTCGA TGCTGCCGAC GTACGACCCC 
GGTGACCTGG TCCTCACCTG GCGCTCCGGG TCCTACCCGG CGGGGACGCC GATCGTCTAC 
CGCATCCCCG ACGGCCCCGG GGCCGGCCTG AACATCGTCC ACCGGGTCGT CGAGGTGCGT 
CCCGACGGCA CCCACGTGAC GAAGGGCGAC CACAACGACC ACGTCGACCC GTGGCGTCCG 
ACCGACGCGG ACGTCACGGG TCGGGTGGCG CTGCACGTGC CGCGCGGCGG GATCCTGCTG 
CGCTGGTTCG GGTCACCCCT GCTGCTCGCG ATGATCTCCG GCCTGCTCGC CGGCGCCTCG 
GTGTTCGGGT GGGCGGGCCG GGGCGGGGGC CCCCCACCCC CGGGCGGTGG CGCCGGCATG 
CCCCGGCGCC ACCGCCGACC CGCCCCGCGC AGCAGGGTCG CGCTGCGGCT CGCAACAGCG 
GGGACGGCGC TGGCTGCGGC ACTGGCCTCG ACGCTGACCG CGACCAGCGC GTCCGCGGCC 
CCGATCGGGA CCCTCACCTC GGCCGACCTG GACGCGTTCA CGGTGCCGAG CTCGTTGGCG 
GCCAACCCGG TCTCCTACGA GCAGGTCCTC ACCAGCGAGA CCGCGCTGGA GTACTGCGCG 
ACCGTGACGG TCACCAACCA CTCCGACCAG GCCGTGGAGT GGGAGATCAC GCTCAACATC 
TCCCAGCAGC CCTACAACGC CACCGCCGTG TCGTCGTCGT ACAACGTGAC CACCGTGTCC 
TTCCAGCCGA ACCTGTGGCG GGTCAGGGGC GTCGAGTTCA ACTCCGTGCT CGCCGCAGGT 
GGGTCGTACG TGTGGGGCTA CTGCGGCACC CGCACGCCGC CCGACCTCGC CGACGCGACC 
GCGGTCGCGA CCGTCACCAG CTCGGGCGGC GGCCAGTACT GCGCGACCGT GGCCGTGACG 
ACGCTCTCGA CGGACTGGAT CCGGTGGCGG GTGAGCATCG ACCACGCGAC CGTCGGGCTC 
ACCGACAACA ACTACTGGCT CGCCGCAGAG CCCACCAACG CCAGCAACGC CACGACGATC 
TCCTTCGACG GCGGGACCGG CACCTGGGTG GTGCGCGGCT CGGGCAGCAA CGAGTACGTC 
CGGGCCACCA GCCCCGCCAG CTGGAGCTAC TGCGCACCGA TGTCGGCGGC CTCCCCGCTC 
GTCGATGCGA CCGTGAGCGC GACCATCACC AGCTCCGGCG GTGGGCAGTA CTGCGCCGAC 
GTGACGGTCT CGACGCTGTC CCCGACGTAC GTGAAGTGGC GTGCGACCAT CGACCACACC 
ACCCCCGGCC TGACCAACGC CGTGTACTGG CTCGGCGCCC AGCCGACCAA CTTCTGGAAC 
GCGACGAGCA TCTCGTTCGG CTCGGGCGCC TGGGTGCTCA AGGGCACGGC GAGCAACGAG 
CTGATCCGGC TCGGCGAGCC GGTCAGCTGG GGCTACTGCG CGCCGACCAA CCCGGACGCC 
GACCTCGTGG ACGCGACGGT CTCGGCCACG ATCACCAGCT CCGGGGGCGG GACCTACTGC 
GCGAACGTCA CGGTGTCGAC GACCTCGACC CAGCCCGTGC GCTGGCGGGC GACCATCGAC 
CACACCACCC CCGGGCTGAC CGCGCCGACG TACTGGCTGG TCGCCCAGCC GACGAACTTC 
TGGAACGCCA CCAGCGTCTC CTTCACCGCG CTCACCGGGA CCTGGGTGCT GCACGGCCTG 
AGCTGGAACG AGCTGATCCA GGCCGGCCAG CCCCAGACGT TCGGCTACTG CACCTGA 

 

Protein sequence

MVELDTRPRR RRSWPRRLFS LLRWGFLLAV LALSVPGPFG PARLGVTVVS GPSMLPTYDP 
GDLVLTWRSG SYPAGTPIVY RIPDGPGAGL NIVHRVVEVR PDGTHVTKGD HNDHVDPWRP 
TDADVTGRVA LHVPRGGILL RWFGSPLLLA MISGLLAGAS VFGWAGRGGG PPPPGGGAGM 
PRRHRRPAPR SRVALRLATA GTALAAALAS TLTATSASAA PIGTLTSADL DAFTVPSSLA 
ANPVSYEQVL TSETALEYCA TVTVTNHSDQ AVEWEITLNI SQQPYNATAV SSSYNVTTVS 
FQPNLWRVRG VEFNSVLAAG GSYVWGYCGT RTPPDLADAT AVATVTSSGG GQYCATVAVT 
TLSTDWIRWR VSIDHATVGL TDNNYWLAAE PTNASNATTI SFDGGTGTWV VRGSGSNEYV 
RATSPASWSY CAPMSAASPL VDATVSATIT SSGGGQYCAD VTVSTLSPTY VKWRATIDHT 
TPGLTNAVYW LGAQPTNFWN ATSISFGSGA WVLKGTASNE LIRLGEPVSW GYCAPTNPDA 
DLVDATVSAT ITSSGGGTYC ANVTVSTTST QPVRWRATID HTTPGLTAPT YWLVAQPTNF 
WNATSVSFTA LTGTWVLHGL SWNELIQAGQ PQTFGYCT