Gene Noca_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1657 
Symbol 
ID4600036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1761215 
End bp1762474 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content76% 
IMG OID639776256 
Producthypothetical protein 
Protein accessionYP_922857 
Protein GI119715892 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG2508] Regulator of polyketide synthase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGCC CGACCGTGCA CCCGACGCCC TGGCAGGACC TGGGCGCCGA CGTCGGGGCC 
GCGCTCGAGC GCCGCCTGGA GACCATGGTC GAGGAGCTCG CCCACGGCGT GACCGTGTCG
GTGCCCGGCT TCGCCGGCAT CGACCAGCCG CGCTTCCACC GAGACGCCCG CGAGACGGTG
CGCGTCGCGC TGCGTCGCTT CGTCACCCTT GCCGGCACCG AGGAGCCGGC GCTGACGCCC
GAGGTTCGCG AGGTGTACGT CGCCCTCGGG GCCGCCGAGG CCCGCGAGGA CCGGGGCCCG
GACGCGCTCA TCTCGGCGTT CCGCGCGGCC GCCCGGCTGC TGCTGCGGGA GGCGAGCGAC
GCCGTGCTCG CCGACGGCCC GCTGAGCGTC GACCAGGTCC TGCAGATCGC GGACGCGACG
AACGCCTTCG TCGACGAGCT GGTCGCCGCC TGCACCGACG GGTACGCGCA GCAGGTGCGC
GAGCTCGCCG GTGAGCGCGA CCGGCGCCGC CACCGACTGG CGGAGCTGCT CCTCGAGGGG
GGCGCGTCGC CGCCCGTGGT GCAGCAGGCC GCAGCCGCGG TCGGGTGGGA CCCGCTGGAC
CGGGTCACGC CGGTCCTGCT GCCCCTCGCG GAGGCCCGCG AGGCCCGGTT CCGCTACGGC
TCGGACGGCC TGGTCAGCGA GCGGGGCGAC CAGGTCGTCG CGATCGTCCG GCACGGGACC
CGGTTCGACC GGGACCTGCT CGGCCCGCGG CTGCGCGGGC GCCGGGCGGT GATCGGCCCG
ACCGGCCCCT GGACGGACCT GCCCGAGGGC GTCCGCCTGA CCGAGCTGAC CGCGCGGCTG
ACCCGCGATC GCGAGGCCGC GATCACCGTC GATGAACACC TGGTGGAGCT GGCCCTGCAG
GGGCAGCCGG CCGCCGTCGC GCTCCTGGTG CGAAGCCGGC TCGCCCCGTT CGACGGGCTG
CCCGAGGGCC AGCGCCGGCA GCTGTTGGTC ACCCTCGAGT CCTGGCTGCG GAACTGGGGT
GCGCGGGCGG CGGTGGCCGA AGAGCTCTTC GTCCACCCGC AGACCGTCAG CTACCGGATC
CGCCGGGTGC GTCAGCTCCT CGGGAACCGG CTCGACGATC CGGCGTACCG CTTCGAGGCC
CTGCTGGCAC TGGCGGACGT GCTCGGTCGC GAAGCCGCCC CGACGCCCGG AGTGAGCCAG
GACACGGGAA GTGACTCAGA GGGTAAGACC CGGTCTCACC ACCGGGGCGG AGGCCCCTAG
 
Protein sequence
MASPTVHPTP WQDLGADVGA ALERRLETMV EELAHGVTVS VPGFAGIDQP RFHRDARETV 
RVALRRFVTL AGTEEPALTP EVREVYVALG AAEAREDRGP DALISAFRAA ARLLLREASD
AVLADGPLSV DQVLQIADAT NAFVDELVAA CTDGYAQQVR ELAGERDRRR HRLAELLLEG
GASPPVVQQA AAAVGWDPLD RVTPVLLPLA EAREARFRYG SDGLVSERGD QVVAIVRHGT
RFDRDLLGPR LRGRRAVIGP TGPWTDLPEG VRLTELTARL TRDREAAITV DEHLVELALQ
GQPAAVALLV RSRLAPFDGL PEGQRRQLLV TLESWLRNWG ARAAVAEELF VHPQTVSYRI
RRVRQLLGNR LDDPAYRFEA LLALADVLGR EAAPTPGVSQ DTGSDSEGKT RSHHRGGGP