Gene Noca_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1648 
Symbol 
ID4600027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1750214 
End bp1751566 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content70% 
IMG OID639776247 
Productpyridine nucleotide-disulphide oxidoreductase dimerisation region 
Protein accessionYP_922848 
Protein GI119715883 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGA CCTACGATCT TGTCGTCGTC GGTGCCGGGA TGGCCGGCGT CGCGGCCGCC 
AACAAGTGTG CGAGCAGCGG TTGGCGGGTG GCGATCGTCG ACGCGCTGCC GTACGGCGGC
ACCTGCGCGC TGCGCGGCTG TGACCCGAAG AAGATCCTGC GACGCGGAGC CGAGATCATC
GACGGTGCCC GGCTCATGCG CGGCAAGGGG ATCGATGGGC AGGGGCTGCG CATCGACTGG
GCGGACCTGA TGCGGCACAA GCGTGGCTTC ACCGACCCGG TGCCCGACAA CCTCGAACGC
GACCTGGCCG GCCATGGCGT CGAGACCCTC CACGGCAACG CGCGATTCCT CGGCGGCAAC
ACCGTCGAGA TCGCGGGCGC CTCCGTGGAG TCGAGACACT TCCTGGTCGC CACCGGCGCA
CGCCCACGCG CGCTCGCCTT CCCCGGCCAC GAGCACCTGA TCGACAGCAC CGACTTCTTG
GACCTCGAGC GGCTGCCTGC CCGGATCCTG TTCGTCGGCG GCGGCTTCAT CTCCTTCGAG
TTCGCCCACA TCGCGACGCG CGCGGGCAGC GCCACCACGG TGGTCGACCG CGGGCCGCGA
CCGTTGCGCG GATTCGACCC AGACCTCGTG GACCTGCTGC TCGGACGCAG CCGGCAGGCA
GGCATCGCCG TACGGCCTGC CACCACGGTC ACGGCGATCG CCAAGGACAA GGCCGGCTAC
CAGGTCACCC TGGAGACTCC CGAGGGATCC GAGACGATCG AGTGCGATCT CGTCGTCCAC
GGCGCCGGAC GCGAGGCCGA CCTCGCCGGT CTCGACCTCG AGGCCGCCGG TGTCGAGTGG
AGCCCACGCG GGGTGCGCGT CGCCGGCCAC CTCCAGAGCA CCACGAACCC CGCGGTCTAC
GCCGCCGGCG ACTCGGCCGA CACCCCCGGG ATGCCCCTGA CCCCGGTCGC TGTGTTCGAG
GGCAGGGTCG CCGCCTCGAA CATGGTGAAC GGCACGACCA GGGCGCCCGA CTACGCCGGC
GTGCCGACGG CCGTCTTCAC CATCCCCGAG CTCGCTCGCG TCGGGCTGCT CGAGCGGGAG
GCCAGGGAGA GAGGGCTGGA CGTCGACGTC CGCTTCAACG ACACCAGTGG CTGGTACTCC
AACTACCGCA CCGGCGAGAC CACGGCCGCG GCCAAGATCC TCGTCGACCG AGCGACCGAC
CGGGTCGTCG GAGCGCATCT GCTCGGTCCC GAGTACGCCG AGCTGATCAA CGTCCTCGGT
CTCGCGATCA AGCTCGGGCT CACGACGCGA CAGCTCAAGT CGACGACCGC CGCCTACCCG
ACGGTTGGAT CGGATCTCGG CTCCATGCTC TAG
 
Protein sequence
MAETYDLVVV GAGMAGVAAA NKCASSGWRV AIVDALPYGG TCALRGCDPK KILRRGAEII 
DGARLMRGKG IDGQGLRIDW ADLMRHKRGF TDPVPDNLER DLAGHGVETL HGNARFLGGN
TVEIAGASVE SRHFLVATGA RPRALAFPGH EHLIDSTDFL DLERLPARIL FVGGGFISFE
FAHIATRAGS ATTVVDRGPR PLRGFDPDLV DLLLGRSRQA GIAVRPATTV TAIAKDKAGY
QVTLETPEGS ETIECDLVVH GAGREADLAG LDLEAAGVEW SPRGVRVAGH LQSTTNPAVY
AAGDSADTPG MPLTPVAVFE GRVAASNMVN GTTRAPDYAG VPTAVFTIPE LARVGLLERE
ARERGLDVDV RFNDTSGWYS NYRTGETTAA AKILVDRATD RVVGAHLLGP EYAELINVLG
LAIKLGLTTR QLKSTTAAYP TVGSDLGSML