Gene Noca_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1640 
Symbol 
ID4600019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1744326 
End bp1745627 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content71% 
IMG OID639776239 
Producthypothetical protein 
Protein accessionYP_922840 
Protein GI119715875 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.923068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGAGT GTCAGACTCG CCACATGAGC GTCGACGTCT CGGACCTGCT GCGCCGCTAC 
GACCAGGTAC GCACCTACAC CGAGCGGCTG TCCGCACCGC TCTCCCCCGA GGACCAGACC
GTCCAGTCGA TGCCGGACGT CTCGCCCACC AAGTGGCACC GCGCGCACGT GACGTGGTTC
TTCGAGACCT TCGTGCTCGC CGACAACGAG CCCGGCTTCA CCCCGTTCCA GGACACGTAC
TGGTTCCTGT TCAACAGCTA CTACGAGGCG GTCGGCCCCC GCCACAGCCG GCCGATGCGC
GGGGTGATCA GCCGCCCCGG CGCCCACGAC GTGGGCGTCT ACCGGTCCAA CGTGGACAAC
CGGATCCACG ACCTCCTGGA CCGGCTCGAC GAGGGCGCCA TCGCGAAGCT GCTGCCGACC
ATCGAGCTCG GGTTCCACCA CGAGCAGCAG CACCAAGAGC TGCTGCTGAT GGACATCAAG
CACGTGCTGT CGCTCAACCC GCTCCGACCC GTCTACGCGG GGCGGCCTCC GGTCGCCGCG
GACCCGACGC CGCTGGGTTG GCGGGAGTAC GACGGCGGGC TGGTCGAGCT GGGCCACGAG
GGCGGCGGCT TCTGCTTCGA CAACGAGCTG CCCCGCCACC AGCAGTACCT GCCGCCCTTC
CGGATGGGCG ATCGGCTGGT CACCAACGGC GAATGGTCGG ACTTCATCGC CGACGGCGGC
TACCAGCGGC CCGAGCTCTG GCTCTCCGAC GGCTGGGCAC GCGTCACCGC CGAGGGCTGG
GGTGCGCCCT TCTACTGGAG CCAGGTCGAC GGGGTCTGGC TCGAGCACAC GCTGCACGGC
ACCTTCCCCG TCGACCCCGC ACTGCCGGTG TGCCACGTCA GCCACTACGA GGCCGACGCC
TACGCGGCCT GGGCCGGCAA GCGCCTCCCG ACCGAGGCCG AGTGGGAGCA CGCCGCCACC
CTCGAGGACG CTGGGCCGGC CGAGCGGCCT GCGAACCTGT CCGACACCGA GTCCTGGCAC
CCCCGCTCGG CCGGGCCGCC GACCGGTGGC CTTCGACAGC TGTTCGGCGA CTGCTGGGAA
TGGACATCCT CGGCCTACCT GCCGTACCCG GGCTTCCACC CCGCCGCCGG CGCCATCGGC
GAGTACAACG GCAAGTTCAT GTCCGGCCAG ATGGTCCTGC GCGGCGGCTG CGCACTGACC
CCGCCGGGAC ATGCCCGCGC TACCTACCGG AACTTCTTCC CCGCCGGAGC CCGCTGGCCG
GTGACCGGTG TCCGGCTGGC CGACGACCTG GGCCGCCAGT GA
 
Protein sequence
MVECQTRHMS VDVSDLLRRY DQVRTYTERL SAPLSPEDQT VQSMPDVSPT KWHRAHVTWF 
FETFVLADNE PGFTPFQDTY WFLFNSYYEA VGPRHSRPMR GVISRPGAHD VGVYRSNVDN
RIHDLLDRLD EGAIAKLLPT IELGFHHEQQ HQELLLMDIK HVLSLNPLRP VYAGRPPVAA
DPTPLGWREY DGGLVELGHE GGGFCFDNEL PRHQQYLPPF RMGDRLVTNG EWSDFIADGG
YQRPELWLSD GWARVTAEGW GAPFYWSQVD GVWLEHTLHG TFPVDPALPV CHVSHYEADA
YAAWAGKRLP TEAEWEHAAT LEDAGPAERP ANLSDTESWH PRSAGPPTGG LRQLFGDCWE
WTSSAYLPYP GFHPAAGAIG EYNGKFMSGQ MVLRGGCALT PPGHARATYR NFFPAGARWP
VTGVRLADDL GRQ