Gene Noca_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1639 
Symbol 
ID4600018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1743236 
End bp1744234 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content72% 
IMG OID639776238 
Producthypothetical protein 
Protein accessionYP_922839 
Protein GI119715874 
COG category[S] Function unknown 
COG ID[COG4301] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03438] probable methyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.147265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCC ACGGTTCCAG GGCCCGACTC GCTCTTGGCG CTGACATCGA CGTCCTGCTG 
GACCCCGCCG ACCTGCGGCG CGGCCTGGAG CTCGATGTTC GCGAGGGCCT GACCACGGCG
CCGAGGTGGC TGCCGCCCAA GTACTTCTAC GACGACCGCG GCAGTGCGCT CTTCGAGCAG
ATCACCCGGC TGCCGGAGTA CTACCCCACG CGGACCGAGC ACTCGATCCT GGTGTCCCGG
GCGGCCGAGA TCGCCCGGGC CTCCGGGGCC GACGTGCTGC TGGAGCTGGG CTCCGGGTCG
TCGGAGAAGA CCCGGATCCT GCTGGACGCC TTGGTGGCGG CCGGCACGTT GGGCGGCTAC
GTCCCGGTGG ACGTCAGCGC GGGTGCGCTG CGCGAGGCCA TCGCGGGGCT GGCGCTCGAG
TATCCGGACC TGCCCGTGCA GGGGGTGGTG GCCGACTTCG ACCGGCACCT GCCGCAGCTT
CCCGCGCCGG GCCGCAGGCT CGTCGCGCTG CTGGGCAGCA CGCTGGGGAA CTACCCGCCC
GCACAGCGCG CGGTCTTCCT GCGCCGGCTG GCCGGATCGA TGCACGGTGG CGAGGCCCTG
CTGCTGGGGC TGGACCTGGT GAAGGACCCG GCCCGGCTGG TCGCGGCGTA CGACGACAGC
GCCGGCGTCA CCGCCGAGTT CAACCGGAAC GTATTGAGGG TGCTCAACCG GGAGCTCGGC
GCCGACTTCG ACCCGCGCCG CTTCGACCAT GTCGCACACT GGGACGCCGA GCAGGAGTGG
ATCGAGATGC GGCTGCGAGC CCGCAGCGAG ATGACCGTGC GGCTGCCGGC GCTCGACCTC
GAGATCGAAC TCGGGCCCGG CGAGGAGATC CGCACCGAGA TCTCCGCGAA GTTCCGCCGG
CCGGCCTTCG CGGGCCAACT GGAGGACGCC GGACTGCGGC CCGAGGGTTG GTGGACCGAC
CCGGCCGGGG ACTTCGCGCT CGTGCTCGCC CGCCGGTGA
 
Protein sequence
MTAHGSRARL ALGADIDVLL DPADLRRGLE LDVREGLTTA PRWLPPKYFY DDRGSALFEQ 
ITRLPEYYPT RTEHSILVSR AAEIARASGA DVLLELGSGS SEKTRILLDA LVAAGTLGGY
VPVDVSAGAL REAIAGLALE YPDLPVQGVV ADFDRHLPQL PAPGRRLVAL LGSTLGNYPP
AQRAVFLRRL AGSMHGGEAL LLGLDLVKDP ARLVAAYDDS AGVTAEFNRN VLRVLNRELG
ADFDPRRFDH VAHWDAEQEW IEMRLRARSE MTVRLPALDL EIELGPGEEI RTEISAKFRR
PAFAGQLEDA GLRPEGWWTD PAGDFALVLA RR