Gene Noca_1622 details

Gene Information

• Locus tag: Noca_1622
• ID: 4600001
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1720298
• End bp: 1720888
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639776221
• Product: cytochrome c oxidase, subunit II
• Protein accession: YP_922822
• Protein GI: 119715857
• COG category: [C] Energy production and conversion
• COG ID: [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.330918
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGCTCC TTGTCATCGA CTCCAGCACG GTCCTGTGGG GCCAGACGAT CATGTACACG 
GCGTACTGCC TGGCGATCAT CAGCCTGGTC TGGTGGTTCG CCACTCGCAT CACGAGACCG 
ACGGGGGAGT CTCGGATCAC CCCGAAGATC TTCTACATCT GGGTGGGCTT CCTGGCCGTG 
GTCGGAGTGA GCCTGCACCT GGTCACCTAC AACACCATCC CCTGGGTCAA GGACGACCTC 
AAGGGCAGCG ACGACTACGT CGCCAGCTAC GACATCACGG TCGGCGCCCA TGCTTGGCAG 
CTGCCCGAGA AGACCCTGCA GGTGCCCTGC GGCGAGCTCG TTCAGTTCTC GGTGACCAGC 
ACCGACCTGA CCTACGGGTT CGGGCTGTTC CGTGACGACG ACTCGATGGT CGCCCAGATG 
CAGGTCGTGC CGGGGCACGA CAACGACCTG CTGTGGACCT TCGAGTCCGA CGGCCTCTAC 
AGCATCCGCT CGACCGAGTA CTCCGGCCCC GAGGGCGACG GGATGATCGT CCCGGACGCC 
GTCGAGGTCA CCGGATGCGA CCAGGCCGAG GCGGAAGGCG GAGCACGATG A 

 

Protein sequence

MRLLVIDSST VLWGQTIMYT AYCLAIISLV WWFATRITRP TGESRITPKI FYIWVGFLAV 
VGVSLHLVTY NTIPWVKDDL KGSDDYVASY DITVGAHAWQ LPEKTLQVPC GELVQFSVTS 
TDLTYGFGLF RDDDSMVAQM QVVPGHDNDL LWTFESDGLY SIRSTEYSGP EGDGMIVPDA 
VEVTGCDQAE AEGGAR