| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1616 |
|---|
| Symbol | |
|---|
| ID | 4599995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 1716341 |
|---|
| End bp | 1716676 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639776216 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_922817 |
|---|
| Protein GI | 119715852 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.630224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAAG CGCTCTACCA CCGGACCACG CCCGAGGAGC ACCGGCGCCG CAAGGATCTC
GCGCCCGGGA TCCACGACGC GTTCACGAGC TTCAGCAAGG CGGTCTTCGC CGAGGGGGCC
ATCGACGAGA AAACCAAGCA GTTGATCGCC GTGGCGGTCG CGCACACCAC GCAGTGCCCC
TACTGCATCG AGGGCCACAC CAAGCTCGCG GTGCGCAAGG GCGCCCGGCC CGAGGAGGTC
ATGGAGGCCA TCTGGGTGGC CGCCGAGATG CGCGCGGGCG GCGCCTACGC GCACTCGACG
CTGGCGATCT CCGCCATGTC CGACGCGGAG AAGTGA
|
|---|
| Protein sequence | MTEALYHRTT PEEHRRRKDL APGIHDAFTS FSKAVFAEGA IDEKTKQLIA VAVAHTTQCP
YCIEGHTKLA VRKGARPEEV MEAIWVAAEM RAGGAYAHST LAISAMSDAE K
|
|---|
| |