Gene Noca_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1614 
Symbol 
ID4599993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1713139 
End bp1714506 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content69% 
IMG OID639776214 
ProductATPase domain-containing protein 
Protein accessionYP_922815 
Protein GI119715850 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.959517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGAC CGAGGCCCCG CGCGCGCAGC GTGCGGGTGC GCGCCACCGC CGCGGCCACG 
CTGGTTGTGG CGATCTTCCT CGCCGCAGGG GCGATCGGCT TCGCTCTGCT GCAGCGGCAC
CAGCTGCAGA CCACCGTCGT CGACGCCGCT CGCCAGCAGG CCGAGGACCT CTCACGCCAG
GTAGCCACAA CGACACCGTC CGGCGCGTTG AGCACGGGTG AAGGCGACCA GTCCCTGGTC
CAGGTCATCG ACGCCCGGGG GAGGGTCATC GCGTCCAGCC CGTCCGTCGA CGGGGAGCAA
CCCATCCTGG TGATCCAGCC CGACCTAGGG ACGACCCAGA CCCGCATCAC CAATTCCCTG
CCCATCGGTG AAGGGAACGA CTTCGTCGTG GTCGCTCGGG GCGCATCGAC CCCCGACGGA
CCAGTCACGA TCCTGGTCGC CCAGAGCTTG GAGCTGGTCA GCGAGTCGAC TGCCATCATC
GTGGGACTGC TCATGGTGGG CTATCCGCTG GTCCTGGTGG CGGTGGGGGG CACCTCGTAC
TGGCTCGTCG GTCGAGCTCT TGCGCCGGTC GAGCGGATCC GCAGCCGCGT GGCCACCATC
CACGGCACCT CGAAGGCCAC CGACCGCGTG CCCGTCCCCG ACACGCACGA CGAGATCAGC
CGCCTCGCCG AGACCATGAA CGCGATGCTC AGCAGGTTGG AGGCCGCCAG CGCCAGCCAG
CGGCAGTTCG TGGCCGACGC CTCGCACGAG CTGCGGAGCC CGCTGGCCAC CATTCGGGCT
GTCCACGAGA TCGCGGTGCT GCACCCGGAC GCCCAGGACT GGGACCAGGC GAACCGCGAG
GTCCTGGGGG AGCTGGACCG CGTCGACCGG CTCGTGGCCG ACCTTGTGCT GCTCGCCCGA
GCAGACGAAC GCGGAATCCC GGTCACCCTC GAGGAGGTCG ATCTCGACGA CCTCCTCCAC
CAGGAAGCCG ATCGCCTGCG ACGACTGCAT AGTCTGGACA TCGTCCTCCA CGCGCCGCCG
GTGCGAGCGG TCACCGACCG CCACCAGCTC GCTCGTGCGC TGCGCAACCT CACCGACAAC
GCGGCTCGCC ACTGCAAGTC CCGAGTCGAG CTGCGTCTCA GCGAAGCCAA CGGATCCGCC
ACGATCGAGG TGACCGACGA CGGCCCCGGG ATCCCCCCGA CCGACCGGAT CCGCGTCTTC
GACCGGTTCG TACGTTTGGA CCAGAGTCGC GCTCGGTCCC AGGGAGGCAC GGGCCTCGGG
CTATCCATCG CCCGTGAGAT CTCCGTCTCC CTCGGGGGGG CCCTTGACCT GGTCGACAGC
GAGGTCGGTG CCCGATTTTC ACTGAAGATC CCACTGGCAC CAGAGTGA
 
Protein sequence
MRRPRPRARS VRVRATAAAT LVVAIFLAAG AIGFALLQRH QLQTTVVDAA RQQAEDLSRQ 
VATTTPSGAL STGEGDQSLV QVIDARGRVI ASSPSVDGEQ PILVIQPDLG TTQTRITNSL
PIGEGNDFVV VARGASTPDG PVTILVAQSL ELVSESTAII VGLLMVGYPL VLVAVGGTSY
WLVGRALAPV ERIRSRVATI HGTSKATDRV PVPDTHDEIS RLAETMNAML SRLEAASASQ
RQFVADASHE LRSPLATIRA VHEIAVLHPD AQDWDQANRE VLGELDRVDR LVADLVLLAR
ADERGIPVTL EEVDLDDLLH QEADRLRRLH SLDIVLHAPP VRAVTDRHQL ARALRNLTDN
AARHCKSRVE LRLSEANGSA TIEVTDDGPG IPPTDRIRVF DRFVRLDQSR ARSQGGTGLG
LSIAREISVS LGGALDLVDS EVGARFSLKI PLAPE