Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1610 |
Symbol | |
ID | 4599989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1709691 |
End bp | 1710389 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639776210 |
Product | two component transcriptional regulator |
Protein accession | YP_922811 |
Protein GI | 119715846 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.496365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGATCT TGGTGGTCGA GGACGACAAG CAGCTGGCGG CTGCGCTGCG GCGTGGGCTG GAGTCCGAGG GCCACGCCGT GGATGTCGCT CTGACCGGTA CCGACGGTGA GTGGTATGCC AGCGAGAACA CCTACGACGC GATGGTGGTG GACGTGATGC TGCCTGGCCT CACAGGTGAC GCCCTGTGTG CCCGGCGTCG GGAGTCAGGT GACTGGACTC CCATCCTGAT GCTCACCGCA CGCAGCGGGC CCGAGCAGGA GGCACGTGCG CTTGACGCAG GGGCGGACGA CTTCTTGTCC AAGCCGTTCT CGTTCATGGT CCTGACCGCC CGGCTGCGGG CGCTGCTGCG GCGAGACAGT CGCGAGCGGC CCACCGTGCT GGAGGTCGGA GACCTGCGCC TGGATCCGGC GCTCCACCGG GTGTGGCGAG GGGACACGTC AATCGACCTG ACTCCCAAGC AGTTCTCCCT GCTGGAGTTC ATGATGCGCC ACGCCGACCA CATCCTCTCC AAGTCGATGA TCTTGGAGCA CGTCTGGGAC TTCTCCTACG ACGGACATCC CAACATCGTC GAGGTCTACG TACGCCAGCT GCGGCAGCGC ATCGACGAGC CGTTCCAGCG ATCCTCCTTG CAGACTGTCC GCCTGGTCGG CTACCGGGTC GTCGACGACC TGGCGCAGCC GGGAACGGCC GCGAAGTGA
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Protein sequence | MRILVVEDDK QLAAALRRGL ESEGHAVDVA LTGTDGEWYA SENTYDAMVV DVMLPGLTGD ALCARRRESG DWTPILMLTA RSGPEQEARA LDAGADDFLS KPFSFMVLTA RLRALLRRDS RERPTVLEVG DLRLDPALHR VWRGDTSIDL TPKQFSLLEF MMRHADHILS KSMILEHVWD FSYDGHPNIV EVYVRQLRQR IDEPFQRSSL QTVRLVGYRV VDDLAQPGTA AK
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