Gene Noca_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1610 
Symbol 
ID4599989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1709691 
End bp1710389 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content66% 
IMG OID639776210 
Producttwo component transcriptional regulator 
Protein accessionYP_922811 
Protein GI119715846 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.496365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGATCT TGGTGGTCGA GGACGACAAG CAGCTGGCGG CTGCGCTGCG GCGTGGGCTG 
GAGTCCGAGG GCCACGCCGT GGATGTCGCT CTGACCGGTA CCGACGGTGA GTGGTATGCC
AGCGAGAACA CCTACGACGC GATGGTGGTG GACGTGATGC TGCCTGGCCT CACAGGTGAC
GCCCTGTGTG CCCGGCGTCG GGAGTCAGGT GACTGGACTC CCATCCTGAT GCTCACCGCA
CGCAGCGGGC CCGAGCAGGA GGCACGTGCG CTTGACGCAG GGGCGGACGA CTTCTTGTCC
AAGCCGTTCT CGTTCATGGT CCTGACCGCC CGGCTGCGGG CGCTGCTGCG GCGAGACAGT
CGCGAGCGGC CCACCGTGCT GGAGGTCGGA GACCTGCGCC TGGATCCGGC GCTCCACCGG
GTGTGGCGAG GGGACACGTC AATCGACCTG ACTCCCAAGC AGTTCTCCCT GCTGGAGTTC
ATGATGCGCC ACGCCGACCA CATCCTCTCC AAGTCGATGA TCTTGGAGCA CGTCTGGGAC
TTCTCCTACG ACGGACATCC CAACATCGTC GAGGTCTACG TACGCCAGCT GCGGCAGCGC
ATCGACGAGC CGTTCCAGCG ATCCTCCTTG CAGACTGTCC GCCTGGTCGG CTACCGGGTC
GTCGACGACC TGGCGCAGCC GGGAACGGCC GCGAAGTGA
 
Protein sequence
MRILVVEDDK QLAAALRRGL ESEGHAVDVA LTGTDGEWYA SENTYDAMVV DVMLPGLTGD 
ALCARRRESG DWTPILMLTA RSGPEQEARA LDAGADDFLS KPFSFMVLTA RLRALLRRDS
RERPTVLEVG DLRLDPALHR VWRGDTSIDL TPKQFSLLEF MMRHADHILS KSMILEHVWD
FSYDGHPNIV EVYVRQLRQR IDEPFQRSSL QTVRLVGYRV VDDLAQPGTA AK