Gene Noca_1599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1599 
Symbol 
ID4599978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1697792 
End bp1699153 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content70% 
IMG OID639776199 
ProductATPase domain-containing protein 
Protein accessionYP_922800 
Protein GI119715835 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCGCG TCGAGCCGGG GACGCCCCAG GGGGGCTGGG GGCGACGCGT GCTGGCCCCG 
GTGCGGGTGC GCGTCACTCT TGCCGCGACC AGCGTGGCCC TGGTGGTCGG AGTCGTCGGT
GCGGTGCTCT TCGTGGCATC CCTGCACCGC GACCTGGAGC GTGCGCTGGT CGCCTCGGCC
CGCCAGCAGG TGGAGACGAT CACCGCGCAG CTCGAGAACG GTTCCACCCC GGCGCAGGCG
GCCGTCACGG CGCGCGACGA CGTGATCACC CAGATCCTGT CACCGAGGGG CGAGATCATC
GGCAGCGACC ATCCGAAGAT CTCGACGCGG CTGCGGGACT CAGCGGGGGT GTCCACCTCG
GTCCAGGTGA CAGGGCTCGA CGACACCTAT GTCGTCGTCG CCGCTGTGGC ACCTTCGGGT
GAGCTGGTCA CCGTTGCACA CTCCCAGGAG CAACTCGCTC AGGCGAGGAG GACGGCGGAG
ACACTGTTGA CCGTCGCACT GCCGCTCGGG CTCGCCCTCT TGGCGGCTGC GGTGTGGCTG
GCGGTGGGAC AGGCTTTGAG GCCCGTGGAG TCGATGCGTC GGGAGGCCGC GCAGATCACC
ACCGCACACC AGGACCGACG ACTGCCGGTG CCGCAAGGCG GCGATGAGAT CTCCCGGTTG
GCGTTGACAC TGAACCAGAT GCTCGAGCGC ATCGGTTCCT CCCAACGTGC CCAGCGCCAG
TTCGCCTCCG ACGCCTCCCA CGAGCTGCGC TCACCGCTGG CCGTGATCCG CCAGCTCGCC
GAGGTCGCGC GCCGGCACCC CGACCAAGCT GACGTCGTCA CCTTGACGAA CGAGATCCTG
GCTGAGGAAG GGCGCATGGA GGAACTGGTG GCCGCGCTCC TGACGCTGGC GAGGCTCGAG
GACCGGGATC CAGCCACGAG CCACCTGGTC GATCTCGATG ACGTGGTGCT CGCTGAGGTG
AAGCGTGCCC GTCCGGCCAG CGGTCCGGAG ATCGATGCGA CCGGCGTAGG GGCAGGGCAG
GTCCGTGGCG AGGAGGTCCT CTTCGGGCAG GTGGTCCGCA ACCTGCTCAG CAACGCCCTA
CGCCACGCAC GCTCCCGCGT CCAGGTGTCC CTCGACGAGG TGGACAGCCG GGTGCGCCTG
GTGGTCGCCG ACGACGGCCC AGGCATCCCT GTCTCCGAAC GCGAGCGCGT CTTCGGGCGG
TTCGTCCGCC TCGACGATGC ACGCGCGCGC GACGAAGGTG GCGCAGGTCT GGGGCTCGCG
ATCGTCGAGA GGGTCGTCAC CGGCCTGCAG GGGTCGGTCG CCGTGGATGA GGCCCCCGGT
GGAGGAGCCA GGTTCACCGT GACGCTGCCC GCAGCCGGCT GA
 
Protein sequence
MSRVEPGTPQ GGWGRRVLAP VRVRVTLAAT SVALVVGVVG AVLFVASLHR DLERALVASA 
RQQVETITAQ LENGSTPAQA AVTARDDVIT QILSPRGEII GSDHPKISTR LRDSAGVSTS
VQVTGLDDTY VVVAAVAPSG ELVTVAHSQE QLAQARRTAE TLLTVALPLG LALLAAAVWL
AVGQALRPVE SMRREAAQIT TAHQDRRLPV PQGGDEISRL ALTLNQMLER IGSSQRAQRQ
FASDASHELR SPLAVIRQLA EVARRHPDQA DVVTLTNEIL AEEGRMEELV AALLTLARLE
DRDPATSHLV DLDDVVLAEV KRARPASGPE IDATGVGAGQ VRGEEVLFGQ VVRNLLSNAL
RHARSRVQVS LDEVDSRVRL VVADDGPGIP VSERERVFGR FVRLDDARAR DEGGAGLGLA
IVERVVTGLQ GSVAVDEAPG GGARFTVTLP AAG