Gene Noca_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1593 
Symbol 
ID4596501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp1692831 
End bp1693385 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content66% 
IMG OID639776192 
Productputative tyrosine recombinase XerD 
Protein accessionYP_922794 
Protein GI119715829 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.611626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTGGG TGGTCGAGCG CAAGAGGGAC GACGGAACGT CGCGCTTCCT GGCCCAGTAC 
CGGGACCCAG GCGGTCGGAT CCGCTCCGCC GGCACGCACT CGTCGCGCCG CGCAGCCGAG 
CGCGCCGGCA ACCGCGAGGA GCAACTGGTC CACGCCGGCT CGTGGTTCGA CCGCTCGCTG 
GGCGCCATCC CGTTCCAGGA GTACGTCGAG AAGCACTGGC TGCCGAGCAA GCACATCGAG 
GCCACCACGC TGGCCGCCTA CATGTCGAAC CTCAACAAGC ACTTCTTCCC GTTCTTCGGC 
AAGAAGCCGA TGTACCAGAT CACCTCGTCG CTCGTGCAGG ACTGGGTGAC CCAGGCAGCC 
GCCGAGGGAC TCTCGGCCAG GTCGATCCGC AAGTACCACA CGATGCTCCA CTCCATCTTC 
AAGCGGGCCG TCCGCGACCA GCTGATCATC AGCAACCCGT GTGAGCACAC CGAGCTGCCG 
AAGATCGTCA CCAAGAAGAC CCGGACGCTG ACGCCCGACG AGTTCGACGT CCTTATCACC 
GCGGTGCCGG ACTGA
 
Protein sequence
MAWVVERKRD DGTSRFLAQY RDPGGRIRSA GTHSSRRAAE RAGNREEQLV HAGSWFDRSL 
GAIPFQEYVE KHWLPSKHIE ATTLAAYMSN LNKHFFPFFG KKPMYQITSS LVQDWVTQAA 
AEGLSARSIR KYHTMLHSIF KRAVRDQLII SNPCEHTELP KIVTKKTRTL TPDEFDVLIT 
AVPD