Gene Noca_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1552 
Symbol 
ID4595492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp1645263 
End bp1645913 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID639776151 
ProductDedA family membrane protein 
Protein accessionYP_922753 
Protein GI119715788 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.487737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTCCGC TGCTGCTCGG CCTCAACTGG ATGAATCCGG ACTGGCTACT GCAGCAGTTC 
GGCCCGTCAT TGGTCTGGGT CAGCCTGCTG ATGATCTTCG TCGAATGCGG CCTGCTGTTC 
CCGTTCCTGC CCGGCGACAC GCTGCTGTTC GCGCTCGGGC TCTTCGTCGC CACCGGCGAC 
ATCTCGCTGC TGTCGGGAAG CCACGGCGTC GAGCTGGCGC TCGCGCTCGG CATGTTCACG 
GCCGCCGCAT TCCTCGGCAA CATTGCGGGG TTCGAGATCG GCCGCCTCAT CGGGCCGCGG 
CTCTACCGAC GCGACAGCCG CCTGCTGCGG CGCCGCCACC TCGACAAGAC GCACGCATTC 
TTCCAACGCC ACGGCAATCG AGCGATCGTG ATCGGCCGCT TCGTCCCCTT CATTCGCACC 
TACATCACAT TGACCGCCGG CGTTGCTCGC ATGGAACGAC GCCGATTCGT CCTCTGGAGC 
GCCCTTGGAG CGACGGCCTG GGTCGCCAGC ATCACTCTCC TCGGATACTT CCTCGGCACC 
ACGGTCCCGT CGATGAAGGA CAACATCGAC TCCGCCATCC TCGCCATTCT GGCGTTCTCA 
GCACTGCCGG CCGCCTATCA CTGGTGGCGC CGCCGCCAGA CGCAGACCTG A
 
Protein sequence
MVPLLLGLNW MNPDWLLQQF GPSLVWVSLL MIFVECGLLF PFLPGDTLLF ALGLFVATGD 
ISLLSGSHGV ELALALGMFT AAAFLGNIAG FEIGRLIGPR LYRRDSRLLR RRHLDKTHAF 
FQRHGNRAIV IGRFVPFIRT YITLTAGVAR MERRRFVLWS ALGATAWVAS ITLLGYFLGT 
TVPSMKDNID SAILAILAFS ALPAAYHWWR RRQTQT