Gene Noca_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1551 
Symbol 
ID4595491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1644061 
End bp1645179 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content73% 
IMG OID639776150 
Producthypothetical protein 
Protein accessionYP_922752 
Protein GI119715787 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.169647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCC AGACAGTGCC TCCCGCGGCG GCGCCGCTGC TCGCCCTCAC GCCCGGAGCG 
CCCGCACCGC GCGTCGCCGT GATCACCGGC AGCTACGGCG CGGGCCACAA CTCCGCGGCA
CGCGAGATCG CCCGCGTCCT CACCACCGCG GGGTGCGAGG TCGCGATCCA TGACGTCGTG
ACGCTGCTGC CGTGGAGGAT CGGGCCGATC CTGCGGCGCG TCTACTACGC GCAGCTGCGG
CGGCGTCCCA ACTCCTGGGG AACCACCCTG CGGCTGCTCG AGCCGGGCCG CGCGGCCCAC
CGGTTGGTGA CGTGGCTGCT GGCCTTCGCC GCCGCCCCCG TCGTCGAAGC CACTCGCGGC
TGTGACCTCG TGGTCACCAC CCACCCGTTC GGCGCCCAGG CCCTCGGGCA CGCCCGAACG
ACCGGCGACC TCGCCGTACC CGCAGTTACC TACCTCACCG ACACCTCGGT CCACCCGCTG
TGGATCCACC CCAGGGTCGA TCTCAACCTC GCCATCCACG ACGTCGCGGC AGCCGAGGCA
CGCCGCTGGG GCGGACGAAC CGACGTCGTT CGGCCACTCA TCCCGACGCG TCGCGAGGCG
CCCGCGCCGA TCCACGGTGA ACCGAGAGCC GCAGACATCA CGGGCCCATG GGCTTTGGTC
ACCGGCGGCT CGCTGGGCAT GGGCCAGCTG GCGGCAACCG CGCGCGACAT CCTCGAGGAC
GGGCAGATGA CACCGGTCGT GCTCTGCGGG ACCGACGACC GGCTTCGTCG TCGCCTCGCC
CGGATCCCCG GCGTGGTTGC GCTCGGCTGG CGCGACGACA TCCCGGATCT GATGGCGGCC
TGCGACTGCA TCGTGCAGAA CGCGGGTGGC TTCACCTCGC TGGAGGCACT GGCCTCCGGT
AAGCCGGTGA TCACCTACCG GCCCCTGCCG GGCCACGGCG TCGCGAACTC GGCCAACCTG
GAGGCGGCGG GCCTGATCCC CTGGGCCCGC ACCCCGGAGG AGCTCGCAGT GTGGATGGCG
GGCGCCCAAG TCGCCCCCCG CCACAACCGC CTCCCCATGG ACGCCCCCGA CCTGCTCGAC
GTGCTCACCG GCCGACATGC TGCAACTGTC GCCGCATGA
 
Protein sequence
MTIQTVPPAA APLLALTPGA PAPRVAVITG SYGAGHNSAA REIARVLTTA GCEVAIHDVV 
TLLPWRIGPI LRRVYYAQLR RRPNSWGTTL RLLEPGRAAH RLVTWLLAFA AAPVVEATRG
CDLVVTTHPF GAQALGHART TGDLAVPAVT YLTDTSVHPL WIHPRVDLNL AIHDVAAAEA
RRWGGRTDVV RPLIPTRREA PAPIHGEPRA ADITGPWALV TGGSLGMGQL AATARDILED
GQMTPVVLCG TDDRLRRRLA RIPGVVALGW RDDIPDLMAA CDCIVQNAGG FTSLEALASG
KPVITYRPLP GHGVANSANL EAAGLIPWAR TPEELAVWMA GAQVAPRHNR LPMDAPDLLD
VLTGRHAATV AA