Gene Noca_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1549 
Symbol 
ID4595489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1642062 
End bp1643333 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content71% 
IMG OID639776148 
Productmajor facilitator transporter 
Protein accessionYP_922750 
Protein GI119715785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0231798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCAGA CACCCGCGAG CGCCGCCACA TCGACCACTC AGAGCGGAGC ATGGTCGCCG 
TGGCGAACGG TCCTCGCCTT CGGCCTCGTC AGCTTGGCCG CCGACATGGT CTACGAAGGC
ATGCGGGCAA CGGCCGGACC CTTCCTCGGC ACCCTCGGCG CGTCTGCGCT CACCGTGGGC
CTGGTCACCG GCGCCGGCGA AGGCATCGCG CTGGTACTCC GGCTGGTCAC CGGCGTCTGG
GCCGACCGGA GCCACCACCA CTGGCGGCTG ACCGTCCTCG GCTACGCCAT GACCGCCGTC
TGCGTCCCGC TGCTCGCGAT CACCCCGTTC ATCGGCGTTG CCGGGCTCGC CGTCGCCGCA
ACCCTGATCC TGCTCGAGCG CACTGGAAAG GCCGTCCGCA GTCCGGCAAA GTCCGCCCTG
CTTGCACGGA TGGCGACCGC GACCGGCCGA GGCAAGGGAT TCGCAGTCCA CAAGGCCCTC
GACCAGATAG GCGCCTTCTC CGGACCGCTC CTCCTGGCCG GAGTCGCGGC CGCGACCGGT
GTGCTGTGGC CGGGCTTCGC GATCCTGGCG ATTCCCGGGG CGCTCTCCCT CGTGCTGCTG
GCACAGCTGC GCCTTCGGGC ACCGATCGTG ACCGAACCCG AGCGCGACGA CGCGCCCCTT
CCGGCAACGA GCGCGCTCGT GGCTGTCGGC AAGGCGGTGG TGGGCAGCGA TCTGCCGCGC
GCGTTCCACC TCTTCGCCCT GGCCACCGCG ATGATGACTG CTGGCCTGAT GACGTTCGGG
GTCATCTCAT TCCGCCTCGT ACAAGACGGG CTCCTGGCCG CAGCCGCCGT CCCCCTCGCG
TACGCCCTCG CCATGGCCGT CGAGGCCATT GCCGCCCTCG GCACCGGGCA CCTCTTCGAC
CGCCGAGGTG GTCGCGTCCT GCTGGCCGTC CCGGTTCTCG TCGCGATCGT GCCACTCTGC
GTCTTCGCTA CCCAACTGTG GCTGGTGCTC GTCGGCATCG TCGTGTGGGG CGTCGCCACC
GGCATCCAGG ACTCGACCGT CAAGGCCTAC GTCGCCGACC TCGTCCCCGC GCCCCGCCGA
GCCACCGCCT ATGGGGTCTT CGCCGCCGTC CAAGGACTCG GTGCGCTCGC CGGCGGTGGC
CTCGCCGGCG CGCTGGTCAC CGGTCACGTC CCGATCCTGG CAGCCGTCAT CGGCGGGCTT
CAGGCGGTCG CGTTCATGCT CCTGATGCGC CTCACCCGTC GCGAGTCCGG GGCGCCGGCC
GAGTCGCGCT GA
 
Protein sequence
MTQTPASAAT STTQSGAWSP WRTVLAFGLV SLAADMVYEG MRATAGPFLG TLGASALTVG 
LVTGAGEGIA LVLRLVTGVW ADRSHHHWRL TVLGYAMTAV CVPLLAITPF IGVAGLAVAA
TLILLERTGK AVRSPAKSAL LARMATATGR GKGFAVHKAL DQIGAFSGPL LLAGVAAATG
VLWPGFAILA IPGALSLVLL AQLRLRAPIV TEPERDDAPL PATSALVAVG KAVVGSDLPR
AFHLFALATA MMTAGLMTFG VISFRLVQDG LLAAAAVPLA YALAMAVEAI AALGTGHLFD
RRGGRVLLAV PVLVAIVPLC VFATQLWLVL VGIVVWGVAT GIQDSTVKAY VADLVPAPRR
ATAYGVFAAV QGLGALAGGG LAGALVTGHV PILAAVIGGL QAVAFMLLMR LTRRESGAPA
ESR