| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1541 |
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| Symbol | |
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| ID | 4595481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1634291 |
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| End bp | 1635604 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639776140 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_922742 |
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| Protein GI | 119715777 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC TCGACTACGC ACTGATCAAG CGGCTGCAAG GCGAACTCGG TCGGCTCCGA
CAGGAGGAGA TCCTGCGGCG GCGGAGCGCC AACCTCCCAG CGCTCACCGG TCCCGACGCG
GTCCAGCACG GCAAGGCGCT GGTCCAAACG GTTGTCGGAG ACTACGAGTC GAACCTCGTC
GAGACAGGTT CCGAGCCCAT CACGTGGGAA GCGCGGCAGG ATCTCGTCGA AGCGCTGGAG
TCCCGTCTCT TCGGAGCGGG CAGCCTGCAG GCACTACTCG ACGACGCGAA CGTCGAGAAC
ATCGACATCA ACGGCTTCCA ACACGTGTAC GTCGAGTACG CCGACGGCAC TACCGCGAAG
GTGCGACCGA TCGCCGGATC GGACGAGGAG CTCGTCGAGA CCGTCCAGAC GCTCGCGGCA
CACGAGGGGC TCTCGGCTCG GGCCTTCGAC GTCGCCAACG TTCGCGTGAA TCTCCGGCTC
CCGGATGGTT CGCGCCTCTA TGCCGTCCAG TCGGTGACGA AGCAGCCGGT CGTCTCGATC
CGACGCCACC GCCACCCTCG CGTGACTCTC AAGGACCTGA TCGGCCTGGA GACGATCGAC
GAGGAGATGG CCGACTTCTT GGCAGCACTG GTCAGAGCCC GCAAGAACGT CATGGTCGCC
GGGGCCACCA GCGCGGGGAA GACGACCATG CTCCGGGCAC TTGCTTCCGA GATCGGTCCG
GACGAACGCA TCCTCACAGT CGAGCGTTCG CTCGAGCTCG GCCTCGACGA GGATCTGGAA
CACCACCCCA ACGCGATCGC GTTCGAGGAG CGCCTGCCGA ACGTCGAAGG GGCCGGCGCC
GTCACGATGG CCGAGTTGGT CCGCGACACC CTTCGCATGA ATCCCTCCCG CGTGATCGTC
GGGGAGGTCC TCGGCGACGA GGTCGTCACG ATGCTCAACG CGATGACCCA GGGCAACGAC
GGCTCGCTGT CCACGATCCA CGCGAATTCG TCCTCCGACG TCGTCCACAA GATTGCGACG
TACGCCATCC AGGCGCCCGA ACGACTGCCT TGGGAGGCGA CCGTACGGCT GGTCGCGACG
GCGCTGGACT TCGTGGTGTT CATCCGTCGG GTGCGCGGCG AGGACGGGCA GCGACGGGTC
GTCGAGTCGA TCCGCGAGAT CGCCGGGATC AGCGACGACG GCCAGCTCCA GACCAACGAG
CTGTGGGCAC CGGATTCGTT CGGCAACGTC GTACGACGCC ACGGCGTCCA GGTGCGAGCC
CACGACGACC TGGTGGCGGT GGGTTGGCAG CCGGAGCCGG GTGGGTGGTC GTGA
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| Protein sequence | MTDLDYALIK RLQGELGRLR QEEILRRRSA NLPALTGPDA VQHGKALVQT VVGDYESNLV
ETGSEPITWE ARQDLVEALE SRLFGAGSLQ ALLDDANVEN IDINGFQHVY VEYADGTTAK
VRPIAGSDEE LVETVQTLAA HEGLSARAFD VANVRVNLRL PDGSRLYAVQ SVTKQPVVSI
RRHRHPRVTL KDLIGLETID EEMADFLAAL VRARKNVMVA GATSAGKTTM LRALASEIGP
DERILTVERS LELGLDEDLE HHPNAIAFEE RLPNVEGAGA VTMAELVRDT LRMNPSRVIV
GEVLGDEVVT MLNAMTQGND GSLSTIHANS SSDVVHKIAT YAIQAPERLP WEATVRLVAT
ALDFVVFIRR VRGEDGQRRV VESIREIAGI SDDGQLQTNE LWAPDSFGNV VRRHGVQVRA
HDDLVAVGWQ PEPGGWS
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