Gene Noca_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1508 
Symbol 
ID4595659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1598940 
End bp1602122 
Gene Length3183 bp 
Protein Length1060 aa 
Translation table11 
GC content76% 
IMG OID639776106 
ProductUvrD/REP helicase 
Protein accessionYP_922709 
Protein GI119715744 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGTTC CCGAGCTCGA CGAGCACCAG CGCCGGGTGG TCGACCATCC CGGCGGGCCG 
CTGCTGGTGC TGGCCGGCCC CGGCACCGGC AAGACCACGA CCCTGGTCGA GGCGATCGTC
GACCGCATCG AGTCCCGCGG TGCCAAGCCC GACGAGGTCC TGGCGCTGAC GTTCTCCCGC
AAGGCCGCCG AGCAGCTGCG CGACCGGGTC ACCGCCCGGC TGGGACGCAC CATGTCGACC
ACGATGAGCT CGACCTTCCA CTCCTTCGCC TACGCGCTGA TCCGGCGCTA CTCCCCGGCC
GAGCTCTACG AGGCGCCGTT GCGGCTGCTG TCGGCCCCCG AGCAGGACGT CGTGCTCCGC
GAGCTCCTCA CCGACCATCC CGAGTCGGTC GTCTGGCCGG ACTCGCTGGC CCGCGCCCTC
GGCACCCGCG GCTTCGCCCG CGAGGTCCAC TCCGTGCTGT CCCGCGCGCG CGAGAAGGGC
CTCGACGGGG TCGCCCTGCA GGCGCTCGGC GAGGCCGAGG GCCTGCCGGA GTACGTCGCC
GCGGGGCTCT TCCTCGACCA GTACCTCACC AACCTCGACT CCCAGGGCGC CACCGACTAC
GCCGACCTGA TCCGCCGCGC GACCATCGAG GCCGAGACCC ACCGCGACGA GCTCCGAGCA
CGGATCGGTG CGGTGTTCGT CGACGAGTAC CAGGACACCG ACCCCGGCCA GGTCGCGCTG
CTCCGCGCGC TGGCGGGCGA CGGTCGCGAC CTCGTCGTCG TGGGTGACCC GCACCAGTCG
ATCTACGGGT TCCGGGGCGC GGAGGTGCGC GGCATCCTCG AGTTCCCCAC TGCGTTCCCC
CGCACCGACG GCGCGCCGGC CGACGTGGTC GCGCTGCGCA CCACCCGCCG GTTCGGGCCC
CGGCTGCTGA TCGCCTCGCA GCGGGTCGCG GGGCGGTTGG CGCTGCCGGG CAGCATCCCC
GAGGAGGCGC GCTCGGCGTT CCTCGCGCCC GAGGCGCAGC CCAACCCGCT CGGCGACGGG
CGGGTGCTGG TCCGCACCTT CGACACCGAG CGTGCCGAGG CCGAGCACCT CGCCGACCTG
CTCCGCCGGG CCCACCTGGA GGACGACGTC CCGTGGGACC AGATGGCGGT GCTGGTCCGC
TCGGGCCGTA CGTCGATCCC GCCGCTGCGC CGAGCGCTCG GCGCCGCCGG GGTGCCGGTC
GAGGTGGCCA GCGACGAGGT GCCGCTGGTC CGCGACCCGG CGGTGCTGCC GCTGCTCGAC
GCCCTGCGTG CCGTGGTCGA CCTCGACACT CGGCCGGACG AGGGCGAGGT GGAGCACGTC
GCCCCGGAGA ACGGGTGGAG TCTCGACCCC GCGCGCGCCG AGGGCTTGCT GCTCGGCCCG
CTCGGCGGGC TCGACGCGGG TGACCTGCGC CGCCTCGCGC GCCGGCTGCG GACCCGCGAG
AAGGAGCAGG GCAAGGCCGA GGCCCGCACC CCGCGCACCT CCCGCGACCT GGTCCGCCGG
GTGGTCGTCG AGCCGGGCTT CCTCGACGGG CTGGACGGCC CCGAGGTGGT CCGCGCCCGG
GCGCTCGCCC AGCTCCTGCT CGACGCCCGC GAGGCGCTGC GCGTCGGCGC CTCGGCCGAG
GAGCTGCTCT GGACGCTGTG GTCCCGCACC GGCTGGCCGG CCCGGCTGCG CCGGTCGGTC
GACCTCGGCG GTGGGGCGGC CCGCCGGGCC CACCGTGACC TCGACTCGGT GTGCGCGCTG
TTCGACGTCG CCGCCCGCGC GGACGAGCAG CGCGACCACG TCGGGGTCCG AGCCTTCCTC
GCGACGCTCG TGCAGCAGCA GATCCCGGCC GACACGCTCG CCGAACGGGG CGCCCGCGGC
GCCGCCGTAC GCCTCCTGAC CGCCCACCGC GCCAAGGGCC TGGAGTGGCG ACTGGTCGTC
GTCGCCCACG TCCAGCAGGA CGGCTGGCCG GACCTGCGGC GCCGCTCGAC GCTGCTGCAG
GCCGACCGGA TCGGTGAGCA CGGCGTGGTG CCGCCGGTGT CGACCCGCGA GCTGCTGATG
GAGGAGCGGC GGCTCTTCTA CGTCGCCTGC ACCCGCGCCC GGCAGCGGCT GGTCGTCACC
GCGGTCGCGT CGCCCGACGA CGAGGGCGAG CAGCCGTCCC GGTTCCTCGA CGAGCTCGGG
GTGGGCGTCG AGCGCGTCGT CGGCCGGCCG CCGCGGCCGC TCTCGCTCCC CGGGCTGGTC
GCCGAGCTGC GCCGTACGCT CGCCGACCCC GAGACCTCCG AGCCGCTCCG CGAGGCCGCC
GCCCGCCGGC TCGCGCGGTT GGCGCCCGAG GTCCGGATCG CCGATCCGTC GAGCTGGTGG
GGCACCCGCG CCGCCACCCG CTCGGTCGAG CCGATCCGCG ACCCCGGCCA GCCGGTGCCG
GTCTCGGCGA GCGTGCTCGA GGCGGTCGCG GTCTGCCCGA CCCAGTGGTT CCTCGAGCGC
GAGGCCGGCG GCAGCGCGCG CGCCCACCAG TCCGCGAACC TCGGCGAGCT GCTCCACGCA
CTCGCCCAGC GGGTCGCGGC CGGTGAGCTC GAGCCCGCGG TCGAGGTCCT CATGGAGCAC
GTCGACGCGG TGTGGGACCG GCTCGACTTC CGCACGCCCT GGTCGAGGGC GCGCGAGCAC
GACCGGGTCC GCGCGGCGAT CGGCCGGTTC CTCCAGTGGC ACCTCGCCAA CCCGCGCGAG
CTGATCGCCA CCGAGGCGCC GTTCACCACC GTCGTGGCGC TCGAGGGCGG CGAGCAGGTC
AAGATCAGCG GCTACGCCGA CCGGGTCGAG CTCGACGCGG ACGGCCACGT CGTCGTGGTC
GACCTCAAGT CCGGGCGCAC CAAGCCCAGC AACAGGGCGG TCGAGGGCCA CGTCCAGCTC
GGCCTCTACC AGTACGCCGT CGACCACGGC GCCCTCGCCG ACCTCGCACC CGGCGCCCAT
GCCGGCGGCG CGGAGCTCGT CCAGCTCGGC CTGACCGACG GCGGCGAGGC CGCTGTCGTC
CAGGCGCAGG ACGCCCAGCC CGAGGACGGC CCGGCGCGCG ACGACCTCCG CCGGCGGCTC
GACCATGCCG CCGCCCTGCT GCGCGCCGAG ACGTTCCCGG CGGTCGCCGG CCAGCACTGC
CGCGACTGCA GCTTCGTCGC GATCTGCCCG ATCAAGAGTG CCGGGTCGGT GACCGCCCAA
TGA
 
Protein sequence
MRVPELDEHQ RRVVDHPGGP LLVLAGPGTG KTTTLVEAIV DRIESRGAKP DEVLALTFSR 
KAAEQLRDRV TARLGRTMST TMSSTFHSFA YALIRRYSPA ELYEAPLRLL SAPEQDVVLR
ELLTDHPESV VWPDSLARAL GTRGFAREVH SVLSRAREKG LDGVALQALG EAEGLPEYVA
AGLFLDQYLT NLDSQGATDY ADLIRRATIE AETHRDELRA RIGAVFVDEY QDTDPGQVAL
LRALAGDGRD LVVVGDPHQS IYGFRGAEVR GILEFPTAFP RTDGAPADVV ALRTTRRFGP
RLLIASQRVA GRLALPGSIP EEARSAFLAP EAQPNPLGDG RVLVRTFDTE RAEAEHLADL
LRRAHLEDDV PWDQMAVLVR SGRTSIPPLR RALGAAGVPV EVASDEVPLV RDPAVLPLLD
ALRAVVDLDT RPDEGEVEHV APENGWSLDP ARAEGLLLGP LGGLDAGDLR RLARRLRTRE
KEQGKAEART PRTSRDLVRR VVVEPGFLDG LDGPEVVRAR ALAQLLLDAR EALRVGASAE
ELLWTLWSRT GWPARLRRSV DLGGGAARRA HRDLDSVCAL FDVAARADEQ RDHVGVRAFL
ATLVQQQIPA DTLAERGARG AAVRLLTAHR AKGLEWRLVV VAHVQQDGWP DLRRRSTLLQ
ADRIGEHGVV PPVSTRELLM EERRLFYVAC TRARQRLVVT AVASPDDEGE QPSRFLDELG
VGVERVVGRP PRPLSLPGLV AELRRTLADP ETSEPLREAA ARRLARLAPE VRIADPSSWW
GTRAATRSVE PIRDPGQPVP VSASVLEAVA VCPTQWFLER EAGGSARAHQ SANLGELLHA
LAQRVAAGEL EPAVEVLMEH VDAVWDRLDF RTPWSRAREH DRVRAAIGRF LQWHLANPRE
LIATEAPFTT VVALEGGEQV KISGYADRVE LDADGHVVVV DLKSGRTKPS NRAVEGHVQL
GLYQYAVDHG ALADLAPGAH AGGAELVQLG LTDGGEAAVV QAQDAQPEDG PARDDLRRRL
DHAAALLRAE TFPAVAGQHC RDCSFVAICP IKSAGSVTAQ