Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1508 |
Symbol | |
ID | 4595659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1598940 |
End bp | 1602122 |
Gene Length | 3183 bp |
Protein Length | 1060 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639776106 |
Product | UvrD/REP helicase |
Protein accession | YP_922709 |
Protein GI | 119715744 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCGTTC CCGAGCTCGA CGAGCACCAG CGCCGGGTGG TCGACCATCC CGGCGGGCCG CTGCTGGTGC TGGCCGGCCC CGGCACCGGC AAGACCACGA CCCTGGTCGA GGCGATCGTC GACCGCATCG AGTCCCGCGG TGCCAAGCCC GACGAGGTCC TGGCGCTGAC GTTCTCCCGC AAGGCCGCCG AGCAGCTGCG CGACCGGGTC ACCGCCCGGC TGGGACGCAC CATGTCGACC ACGATGAGCT CGACCTTCCA CTCCTTCGCC TACGCGCTGA TCCGGCGCTA CTCCCCGGCC GAGCTCTACG AGGCGCCGTT GCGGCTGCTG TCGGCCCCCG AGCAGGACGT CGTGCTCCGC GAGCTCCTCA CCGACCATCC CGAGTCGGTC GTCTGGCCGG ACTCGCTGGC CCGCGCCCTC GGCACCCGCG GCTTCGCCCG CGAGGTCCAC TCCGTGCTGT CCCGCGCGCG CGAGAAGGGC CTCGACGGGG TCGCCCTGCA GGCGCTCGGC GAGGCCGAGG GCCTGCCGGA GTACGTCGCC GCGGGGCTCT TCCTCGACCA GTACCTCACC AACCTCGACT CCCAGGGCGC CACCGACTAC GCCGACCTGA TCCGCCGCGC GACCATCGAG GCCGAGACCC ACCGCGACGA GCTCCGAGCA CGGATCGGTG CGGTGTTCGT CGACGAGTAC CAGGACACCG ACCCCGGCCA GGTCGCGCTG CTCCGCGCGC TGGCGGGCGA CGGTCGCGAC CTCGTCGTCG TGGGTGACCC GCACCAGTCG ATCTACGGGT TCCGGGGCGC GGAGGTGCGC GGCATCCTCG AGTTCCCCAC TGCGTTCCCC CGCACCGACG GCGCGCCGGC CGACGTGGTC GCGCTGCGCA CCACCCGCCG GTTCGGGCCC CGGCTGCTGA TCGCCTCGCA GCGGGTCGCG GGGCGGTTGG CGCTGCCGGG CAGCATCCCC GAGGAGGCGC GCTCGGCGTT CCTCGCGCCC GAGGCGCAGC CCAACCCGCT CGGCGACGGG CGGGTGCTGG TCCGCACCTT CGACACCGAG CGTGCCGAGG CCGAGCACCT CGCCGACCTG CTCCGCCGGG CCCACCTGGA GGACGACGTC CCGTGGGACC AGATGGCGGT GCTGGTCCGC TCGGGCCGTA CGTCGATCCC GCCGCTGCGC CGAGCGCTCG GCGCCGCCGG GGTGCCGGTC GAGGTGGCCA GCGACGAGGT GCCGCTGGTC CGCGACCCGG CGGTGCTGCC GCTGCTCGAC GCCCTGCGTG CCGTGGTCGA CCTCGACACT CGGCCGGACG AGGGCGAGGT GGAGCACGTC GCCCCGGAGA ACGGGTGGAG TCTCGACCCC GCGCGCGCCG AGGGCTTGCT GCTCGGCCCG CTCGGCGGGC TCGACGCGGG TGACCTGCGC CGCCTCGCGC GCCGGCTGCG GACCCGCGAG AAGGAGCAGG GCAAGGCCGA GGCCCGCACC CCGCGCACCT CCCGCGACCT GGTCCGCCGG GTGGTCGTCG AGCCGGGCTT CCTCGACGGG CTGGACGGCC CCGAGGTGGT CCGCGCCCGG GCGCTCGCCC AGCTCCTGCT CGACGCCCGC GAGGCGCTGC GCGTCGGCGC CTCGGCCGAG GAGCTGCTCT GGACGCTGTG GTCCCGCACC GGCTGGCCGG CCCGGCTGCG CCGGTCGGTC GACCTCGGCG GTGGGGCGGC CCGCCGGGCC CACCGTGACC TCGACTCGGT GTGCGCGCTG TTCGACGTCG CCGCCCGCGC GGACGAGCAG CGCGACCACG TCGGGGTCCG AGCCTTCCTC GCGACGCTCG TGCAGCAGCA GATCCCGGCC GACACGCTCG CCGAACGGGG CGCCCGCGGC GCCGCCGTAC GCCTCCTGAC CGCCCACCGC GCCAAGGGCC TGGAGTGGCG ACTGGTCGTC GTCGCCCACG TCCAGCAGGA CGGCTGGCCG GACCTGCGGC GCCGCTCGAC GCTGCTGCAG GCCGACCGGA TCGGTGAGCA CGGCGTGGTG CCGCCGGTGT CGACCCGCGA GCTGCTGATG GAGGAGCGGC GGCTCTTCTA CGTCGCCTGC ACCCGCGCCC GGCAGCGGCT GGTCGTCACC GCGGTCGCGT CGCCCGACGA CGAGGGCGAG CAGCCGTCCC GGTTCCTCGA CGAGCTCGGG GTGGGCGTCG AGCGCGTCGT CGGCCGGCCG CCGCGGCCGC TCTCGCTCCC CGGGCTGGTC GCCGAGCTGC GCCGTACGCT CGCCGACCCC GAGACCTCCG AGCCGCTCCG CGAGGCCGCC GCCCGCCGGC TCGCGCGGTT GGCGCCCGAG GTCCGGATCG CCGATCCGTC GAGCTGGTGG GGCACCCGCG CCGCCACCCG CTCGGTCGAG CCGATCCGCG ACCCCGGCCA GCCGGTGCCG GTCTCGGCGA GCGTGCTCGA GGCGGTCGCG GTCTGCCCGA CCCAGTGGTT CCTCGAGCGC GAGGCCGGCG GCAGCGCGCG CGCCCACCAG TCCGCGAACC TCGGCGAGCT GCTCCACGCA CTCGCCCAGC GGGTCGCGGC CGGTGAGCTC GAGCCCGCGG TCGAGGTCCT CATGGAGCAC GTCGACGCGG TGTGGGACCG GCTCGACTTC CGCACGCCCT GGTCGAGGGC GCGCGAGCAC GACCGGGTCC GCGCGGCGAT CGGCCGGTTC CTCCAGTGGC ACCTCGCCAA CCCGCGCGAG CTGATCGCCA CCGAGGCGCC GTTCACCACC GTCGTGGCGC TCGAGGGCGG CGAGCAGGTC AAGATCAGCG GCTACGCCGA CCGGGTCGAG CTCGACGCGG ACGGCCACGT CGTCGTGGTC GACCTCAAGT CCGGGCGCAC CAAGCCCAGC AACAGGGCGG TCGAGGGCCA CGTCCAGCTC GGCCTCTACC AGTACGCCGT CGACCACGGC GCCCTCGCCG ACCTCGCACC CGGCGCCCAT GCCGGCGGCG CGGAGCTCGT CCAGCTCGGC CTGACCGACG GCGGCGAGGC CGCTGTCGTC CAGGCGCAGG ACGCCCAGCC CGAGGACGGC CCGGCGCGCG ACGACCTCCG CCGGCGGCTC GACCATGCCG CCGCCCTGCT GCGCGCCGAG ACGTTCCCGG CGGTCGCCGG CCAGCACTGC CGCGACTGCA GCTTCGTCGC GATCTGCCCG ATCAAGAGTG CCGGGTCGGT GACCGCCCAA TGA
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Protein sequence | MRVPELDEHQ RRVVDHPGGP LLVLAGPGTG KTTTLVEAIV DRIESRGAKP DEVLALTFSR KAAEQLRDRV TARLGRTMST TMSSTFHSFA YALIRRYSPA ELYEAPLRLL SAPEQDVVLR ELLTDHPESV VWPDSLARAL GTRGFAREVH SVLSRAREKG LDGVALQALG EAEGLPEYVA AGLFLDQYLT NLDSQGATDY ADLIRRATIE AETHRDELRA RIGAVFVDEY QDTDPGQVAL LRALAGDGRD LVVVGDPHQS IYGFRGAEVR GILEFPTAFP RTDGAPADVV ALRTTRRFGP RLLIASQRVA GRLALPGSIP EEARSAFLAP EAQPNPLGDG RVLVRTFDTE RAEAEHLADL LRRAHLEDDV PWDQMAVLVR SGRTSIPPLR RALGAAGVPV EVASDEVPLV RDPAVLPLLD ALRAVVDLDT RPDEGEVEHV APENGWSLDP ARAEGLLLGP LGGLDAGDLR RLARRLRTRE KEQGKAEART PRTSRDLVRR VVVEPGFLDG LDGPEVVRAR ALAQLLLDAR EALRVGASAE ELLWTLWSRT GWPARLRRSV DLGGGAARRA HRDLDSVCAL FDVAARADEQ RDHVGVRAFL ATLVQQQIPA DTLAERGARG AAVRLLTAHR AKGLEWRLVV VAHVQQDGWP DLRRRSTLLQ ADRIGEHGVV PPVSTRELLM EERRLFYVAC TRARQRLVVT AVASPDDEGE QPSRFLDELG VGVERVVGRP PRPLSLPGLV AELRRTLADP ETSEPLREAA ARRLARLAPE VRIADPSSWW GTRAATRSVE PIRDPGQPVP VSASVLEAVA VCPTQWFLER EAGGSARAHQ SANLGELLHA LAQRVAAGEL EPAVEVLMEH VDAVWDRLDF RTPWSRAREH DRVRAAIGRF LQWHLANPRE LIATEAPFTT VVALEGGEQV KISGYADRVE LDADGHVVVV DLKSGRTKPS NRAVEGHVQL GLYQYAVDHG ALADLAPGAH AGGAELVQLG LTDGGEAAVV QAQDAQPEDG PARDDLRRRL DHAAALLRAE TFPAVAGQHC RDCSFVAICP IKSAGSVTAQ
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