Gene Noca_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1500 
Symbol 
ID4596316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1591621 
End bp1592316 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID639776098 
Producthypothetical protein 
Protein accessionYP_922701 
Protein GI119715736 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0203519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCCG AAGTCATGTA CAGCCCCGCC TACGCGACCG CCAAGCTCAC CCTCGCCGCC 
GGCGAGGCCG TCCGCGCCGA GTCCGGCGCG ATGCTCGCGA TGTCGCCCGG CATCGCGATG
GAGACCTCGA CGCAGGGCGG GGTGCTGAAG GGCCTCAAGC GCTCGGTCCT CGGCGGCGAG
TCCTTCTTCA TGAACACCTT CACCGCACAG GTCGACGGCG CCGAGCTGTA CGTCGCGCCC
GCGCTGCCCG GCGACGTCGT CGCGTGGCCG CTCAACGGCG TGCTCTACGT GCAGTCCGGG
TCGTTCCTGG CCGCCTCGTC GAACATCCAG GTCGACACCA AATGGGGCGG CGGCAAGACG
TTCTTCTCCA GCGAGGGCCT GTTCATGCTG CGCATCGAGG GCCAGGGCGA GCTGGTGCTG
TCCAGCTACG GCGCGATCCA CGCGATCGAC CTGCAGGCCG GCCAGACCTA CACGGTCGAC
ACCGGCCACA TGGTCGCCTG GACCGACGGC GTCCAGTACA ACGTGCGCAA GGTCGGCAAC
TGGAAGTCGA CGTTCTTCTC CGGCGAGGGC CTGGTCTGCG ACCTCACCGG TCCCGGCCGG
ATCTACCTCC AGACCCGCAG CCAGGACGCC TTCCTCGGCT GGTTGGTGCC GAAGCTGCCC
ACCCAGAAGA GCGGCGGGGA CAGCCTGTTC TCCTGA
 
Protein sequence
MQSEVMYSPA YATAKLTLAA GEAVRAESGA MLAMSPGIAM ETSTQGGVLK GLKRSVLGGE 
SFFMNTFTAQ VDGAELYVAP ALPGDVVAWP LNGVLYVQSG SFLAASSNIQ VDTKWGGGKT
FFSSEGLFML RIEGQGELVL SSYGAIHAID LQAGQTYTVD TGHMVAWTDG VQYNVRKVGN
WKSTFFSGEG LVCDLTGPGR IYLQTRSQDA FLGWLVPKLP TQKSGGDSLF S