| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1496 |
|---|
| Symbol | |
|---|
| ID | 4596312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1585897 |
|---|
| End bp | 1588017 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639776094 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_922697 |
|---|
| Protein GI | 119715732 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0678775 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGA GCATCCGGAT CGGCATCGAC ACCGGGGGCA CGTTCACCGA CGTTGTCGCG
TTCGACGAGG ACTCGGGGGA GCTGGTCACC ACCAAGACCC CGTCCACCCC GAGCAACCCG
GCGGACGGCT TCCTGGCCGG CATCGACAAG GTGCTCGCCG TGCTCGGCGC GAGCGGCGCC
GACATCGACG CCGTCAGCCA CGGCACCACC GTCGCCACCA ACCAGCTGCT CGAGGGCAAG
GTGGACCGCC TGGGCTTCAT CACCACCGCC GGCTACGAGG CGATGCTCGA GATCGCTCGC
CAGTCGGTGC CCGACGGCTA CGGCAACTCC TACTTCTGGG TCAAGCCGGA CCGGATCGTC
CCGCGTGACC GGGTCAAGGG CGTCGGGGGC CGGCTCGACT TCACCGGGGC GGAGGTGCGG
CCCTTCGACG AGGACGCCGC CCGCGCCGCG GCGCGGTGGT TCCGCGCCCA GGGGATCAAC
ACCCTCGGCG TCTGCTTCCT GCACGCCTAC GCCAACCCCG AGCACGAGGA GCGGATGCGG
GCCGTGCTCG CCGAGGAGCA CCCCGACGCG GTGGTCTCCC TGTCGAGCGA GGTGCTGCGC
GAGTACCGCG AGTACGAGCG CGCGATGACC ACGCTGGTCG ACGCGGCCGT CAAGCCGCGG
CTCTCGGCGT ACGTCTCCAA CATCAAGGCG CGCCTCGCGG GCTACGTCCC GGCGGGTGCT
TCTGGCGGAG CCCCCCGTGT TGTCCCGTTC TACGTGATGA AGTCCAACGG CGGCGTGCTC
TCGGCCGACG AGGTCGTGCA CCAGCCGATC ACCACCGTGC TCAGCGGCCC CGCCGCCGGC
GCCCTCGGCG CCGCGCTGAT CGCGAAGGTG GCCGGGTTCG ACAAGGTCCT CACCTCCGAC
GGCGGCGGTA CGTCGACCGA CGTCAGCGTG GTGATCGACG GCGAGCCGAC GCTGACCACC
GAGGGCTCGG TGGGGGCGTT CCCGTCCAAG ATCCCGATGA TCGACGTGGT CACCGTGGGC
GCCGGCGGCG GCTCGATCGC CTGGCTCTCG CCCGAGGGCA CCCTCAAGGT CGGCCCGCAG
TCGGCGGGCG CCGACCCGGG GCCGCTGTGC TACGGCAAGG GCGGAACCGA GGTGACGATC
ACCGACGCCC ACGTGGTCCT CGGCCGGATC CCCCCGCACC TGCTCGGCGG CGAGATCCCC
CTGGACGTCG ACGCGGCACG CGCCGGCGTC GAGCAGCTCG CCGCGAAGCT CGGCCTCACG
CCGGAGGCCT GCGCCACCGG CATCCTCGAG ATCTCCGCCT GGAACCAGGC CAACGCGCTG
CGCCAGGTGA CCGTCAAGCG CGGCCTGGAC GTCCGCGACT TCACGCTGAC CACGTTCGGC
GGCTCGGGCT CCCTGCTGCT GTGCCGGCTG ATGGACGTCC TCGGGATCCC GACCGTGCTG
GTCCCGCCCA ACCCGGGCAA CGTCTCGGCG TTCGGCCTGC TCACCGTCGA CGTCAAGAAC
GACTACGTGC AGACCCACGT GACCCTCGAC GACCACCTCG ACCCGGCAGC GGTCACCGGC
ATCTACGACG AGCTCACCGC GCGCGCCGCC GAGGCGCTCG CGAAGGAGGG CTTCGAGCCG
GCGGAGCACC AGTTCGTGCG CACGGCCGAC CTGCGCTACT TCGGCCAGGC CTTCGAGGTG
CGGGTACCGG TCGCCGCCGG CGCGCTCGAC CCGCAGGCGG TGGCCGACGC GTTCCACGCC
GAGCACAAGG CGCTCTACGG CTACGACTTC TCCGGCGACT CCAGCCAGCA GGTCGAGTGG
GTCAACCTCC GGGTCTCCGG GATCGGCCCG ATCAAGCGGC CGGCAATCAC CCGCCACCCC
GTCGAGTCGG GAGTTCTGGC GACCGACTCT CCCGACTCGA CCGTCACCAC TCCCGACTCG
ACGGTCCGGG CGGTGTGCTT CGACGCGGCC GAGGGGTACG TCGACACGCC GGTGCTCTGG
CGTCCCGACC TCGCGCCGGG GACGGTCCTG GACGGACCCG CGATCATCGA GGAGTTCGGC
TCCACGGTGC CGCTCCACCC GGGCTTCACG GCCCGCATCG ACGAGTACCT CAACATCATC
GTGACGAGGA GCCAGGCATG A
|
|---|
| Protein sequence | MTRSIRIGID TGGTFTDVVA FDEDSGELVT TKTPSTPSNP ADGFLAGIDK VLAVLGASGA
DIDAVSHGTT VATNQLLEGK VDRLGFITTA GYEAMLEIAR QSVPDGYGNS YFWVKPDRIV
PRDRVKGVGG RLDFTGAEVR PFDEDAARAA ARWFRAQGIN TLGVCFLHAY ANPEHEERMR
AVLAEEHPDA VVSLSSEVLR EYREYERAMT TLVDAAVKPR LSAYVSNIKA RLAGYVPAGA
SGGAPRVVPF YVMKSNGGVL SADEVVHQPI TTVLSGPAAG ALGAALIAKV AGFDKVLTSD
GGGTSTDVSV VIDGEPTLTT EGSVGAFPSK IPMIDVVTVG AGGGSIAWLS PEGTLKVGPQ
SAGADPGPLC YGKGGTEVTI TDAHVVLGRI PPHLLGGEIP LDVDAARAGV EQLAAKLGLT
PEACATGILE ISAWNQANAL RQVTVKRGLD VRDFTLTTFG GSGSLLLCRL MDVLGIPTVL
VPPNPGNVSA FGLLTVDVKN DYVQTHVTLD DHLDPAAVTG IYDELTARAA EALAKEGFEP
AEHQFVRTAD LRYFGQAFEV RVPVAAGALD PQAVADAFHA EHKALYGYDF SGDSSQQVEW
VNLRVSGIGP IKRPAITRHP VESGVLATDS PDSTVTTPDS TVRAVCFDAA EGYVDTPVLW
RPDLAPGTVL DGPAIIEEFG STVPLHPGFT ARIDEYLNII VTRSQA
|
|---|
| |