| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1483 |
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| Symbol | |
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| ID | 4596299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1568825 |
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| End bp | 1569634 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639776081 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_922684 |
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| Protein GI | 119715719 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00140227 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGTCC TGGTCGAGGG CGCCTCCGAC GCCTGGGTGA TCACCCGCCG CAACCTGCGC
AAGATCCTGC GGGTGCCGGA CGTGCTCGTC TTCACGACGC TGTCGCCGAT CATGTTCGTG
CTGCTGTTCG CCTACGTGTT CGGCAACGCG ATCGGCAGCC AGGACACCGG TGTCGACTAC
ACCGAGTTCC TAGTCCCGGG CATCTTCGCG CAGACCGTCG TGTTCGGCGC GACCTTCACC
GGCTACAGCC TCGCCGAGGA CCTCCAGAAG GGCATCATCG ACCGGTTCCG GTCACTGCCG
ATGTCGTCGT CCTCGGTGGT GCTCGGCCGC ACCGTCGCCG ACATCGGCAT CAACATCGTC
AGCCTCGTGG TGATGGCGCT GACCGGGCTC GTGGTGGGCT GGCGGATCCG GTCCTCGATG
GTGGAGGCGC TGGCCGGCTT CCTCGTGCTG CTGGTGTTCG CGTTCGCGAT CTCCTGGATC
ATGGCGACCG TCGCGCTGCT GGTGCGCACC CCCGAGGTCG TCAACAACGC GTCGTTCATC
GTGATCTTCC CGCTGACGTT CATCGCCAAC ACGTTCGTCT CGATCAGCAA CCTCCCCGGC
CCGCTGGCGA CGTTCGCGAA CTGGAACCCG GTCTCCGCGG TCTGCCAGGC GGCGCGCGAG
CTGTTCGGCA ACACCGACCC GGCGGCGACG GTGCCCGACG CGTGGTCGAT GCACCACCCG
GTGCTCTACA CGCTGGTGTG GGTGGTGCTG ATCCTGCTCG TGTTCGTGCC GCTCTCGATC
CGCCAGTACC GCCGCGCCAC CAGTCGCTAG
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| Protein sequence | MSVLVEGASD AWVITRRNLR KILRVPDVLV FTTLSPIMFV LLFAYVFGNA IGSQDTGVDY
TEFLVPGIFA QTVVFGATFT GYSLAEDLQK GIIDRFRSLP MSSSSVVLGR TVADIGINIV
SLVVMALTGL VVGWRIRSSM VEALAGFLVL LVFAFAISWI MATVALLVRT PEVVNNASFI
VIFPLTFIAN TFVSISNLPG PLATFANWNP VSAVCQAARE LFGNTDPAAT VPDAWSMHHP
VLYTLVWVVL ILLVFVPLSI RQYRRATSR
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