| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1482 |
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| Symbol | |
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| ID | 4596298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1567791 |
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| End bp | 1568825 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639776080 |
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| Product | daunorubicin resistance ABC transporter ATPase subunit |
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| Protein accession | YP_922683 |
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| Protein GI | 119715718 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000625937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGCTG TCGGCGGTCC CCGGCAGAGT GGTGCCATGT CGACCGGCAG GCCCACCGCG
ATCCGTGCCA CCGGCCTGGT CAAGAGGTAC GGCGCCGTCA CCGCGCTCGA CGGGCTCGAC
CTGGAGGTGG AGGAGGGCAC CGTCCTGGGC CTGCTCGGGC CCAACGGTGC CGGCAAGACC
ACCGCGGTGC GGGTGCTCAC CACGCTGCTG CGGCCCGACG CGGGCCACGC GGAGGTCGCG
GGCATCGACG TGCTCCGCCA TCCCCGGGAG CTGCGCCGGC GGATCGGGGT GTCGGGCCAG
TACGCCGCCG TCGACGAACA CCTGACCGGC TTCGAGAACC TCGACATGGT CGGGCGGCTC
TACCACCTCG GGGCGGCCGA GAGCCGGGCC CGGGCGCGCG AGCTGCTCGA CCAGTTCGAC
CTCGCGCACG CCGCGGGTCG GGTGGTCAAG GGCTGGTCCG GTGGCATGCG CCGGCGCCTC
GACCTGGCGG GCGCGCTGGT GGCGAAGCCG CCGGTGATCT TCCTCGACGA GCCGACGACC
GGGCTGGACC CGCGCGGCCG GGTCGGGATG TGGGACGTCA TCGAGGAGTT GGTCCGTGGC
GGGACCACGC TGCTGCTGAC CACGCAGTAC CTCGAGGAGG CCGACCGGTT GGCCGATCGG
ATCGCCGTGA TCGACCGCGG CACGGTCATC GCGCTCGGCA CGGCGGACGA GCTCAAGGCG
CAGCTCGGGG GCGAGCAGGT CGAGGTGCGG CTGCCCTCCG GCGGCGACCT GGTGGCGGCG
GCGCGCGCCG CCGCGGGCGT GGGCGTCGGC GAGCCGGTGA TCGACGAGCG GGACCGGCGG
CTGACGGTGC CGGTGGACGG CGGCACCCAC GACCTGCGAG AGCTGCTCGA CCGGCTGGAC
CGGGCCGGCG TCCCCGTCGC CGAGGCCGGG CTGCGCCGTC CGACGCTCGA CGACGTGTTC
CTGGCCCTGA CCGGGCACGC CGCCGAGGAG CCCGCGCCCG CCGGTGAGGA CGCCGACGAG
GACGGAGCCG CGTGA
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| Protein sequence | MAAVGGPRQS GAMSTGRPTA IRATGLVKRY GAVTALDGLD LEVEEGTVLG LLGPNGAGKT
TAVRVLTTLL RPDAGHAEVA GIDVLRHPRE LRRRIGVSGQ YAAVDEHLTG FENLDMVGRL
YHLGAAESRA RARELLDQFD LAHAAGRVVK GWSGGMRRRL DLAGALVAKP PVIFLDEPTT
GLDPRGRVGM WDVIEELVRG GTTLLLTTQY LEEADRLADR IAVIDRGTVI ALGTADELKA
QLGGEQVEVR LPSGGDLVAA ARAAAGVGVG EPVIDERDRR LTVPVDGGTH DLRELLDRLD
RAGVPVAEAG LRRPTLDDVF LALTGHAAEE PAPAGEDADE DGAA
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