Gene Noca_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1442 
Symbol 
ID4597210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp1529817 
End bp1530455 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content79% 
IMG OID639776040 
Producthypothetical protein 
Protein accessionYP_922643 
Protein GI119715678 
COG category[S] Function unknown 
COG ID[COG1652] Uncharacterized protein containing LysM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCTT CAGCGACGCG GTGCCTGGCG GTCTGGGCGG CCGCCAGTGC GCTCGCCGCC 
GCGCTGGGCG CCTGGCTGCT GCCCGTCGCC GTCGGCGACG CCGGTTCGAG GTTCGACCTG 
GTCCTGGTGC GCGCGTGCGC CGCCGTGGCC CTGGTCGGCA CCTGCTGGTT GTGGCTGGCC 
GCCAGTGCGA CCGTCGTGGC GGCGCTGCGC GGCCGGCCGG CGCGCGCGCC GGGCGTCCCC 
GCCGTCGTAC GCCGGCTGGT GCTCGCCGCG TGCGGGGCCG GCCTGGCGGC GGGCCTGGTC 
GCCCCGGCGC AGGCCACGCC GGGCGACGTG CACGTCGATC GGCAGCCGAC AGCCGGGCTC 
GCCGGCCTGC CGCTGCCCGA CCGCGCCGTC GGGCTCCCGG GCCGGGCGCT GCTCTCCCAC 
GGAGCGCCTC GGCCCACCAC TGCCCCCGGC CGGCTCCCGA CGGTCGTCGT CCGGCCCGGC 
GACTCGCTGT GGGAGCTCGC GGCCACCCAT CTCGACGACC CCGGTCGCTG GCCGCAGATC 
TACGCCCTCA ACCGCGACCA GATCGGCCCC GACCCGGGCC TGATCCAGCC CGCGACCCGA 
CTTCGGCTTC CCGCCGACCG ACCGGAGGAG ACCTCATGA
 
Protein sequence
MHASATRCLA VWAAASALAA ALGAWLLPVA VGDAGSRFDL VLVRACAAVA LVGTCWLWLA 
ASATVVAALR GRPARAPGVP AVVRRLVLAA CGAGLAAGLV APAQATPGDV HVDRQPTAGL 
AGLPLPDRAV GLPGRALLSH GAPRPTTAPG RLPTVVVRPG DSLWELAATH LDDPGRWPQI 
YALNRDQIGP DPGLIQPATR LRLPADRPEE TS