Gene Noca_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1439 
Symbol 
ID4597207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1525163 
End bp1526362 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content73% 
IMG OID639776037 
Producthypothetical protein 
Protein accessionYP_922640 
Protein GI119715675 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGTCGT TGAGCAACGC GCAGGCGCGC CGCGTGGCGC TCGCCGCGCA GGGCTTCCTC 
GACCCGCGCC ACACCATCCC GACGATGCGC ACCTTCCAGC GCACCCTGGA GCGCACCGGA
GTGCTCCAGG TCGACTCGGT CAACGTGCTG CAGCGGGCGC ACTACATGCC GGTGTTCTCC
CGGATCGGCC GGTACGACGT CGAGCTGCTG CGGCGCGCGG CAGAGCGCCG GCCCCGGCGG
ATGGTGGAGT ACTGGGCGCA CGTGCAGGCG TACATGCCGG TCGAACTCTG GCCGGTCATG
CAGCACCGGA TGGCGGCGTA CCGTCAGAAG CGGGGCAAGT GGGGGTTCGT CGTGGGTGAC
GACGGCCTCG AGCAGAGCCT GTTGGAGGAG ATCCGCGAGC GCGGCGCCTC GACCGCCCGG
GACCTCGACG ACGGGCTGCC CCGCGACAAG ACCCACTGGG GCTGGAACTG GTCCGAGACG
CGCAAGGTCC TCGACTACCT CTACATGTCG GGCGCCGTGG CGATCGCCGA TCGCAACACC
CAGTTCGAGA TCCGCTACGA CCTGCCCGAG CGGGTCCTGC CGGCCGAGGT GCTCGCGCAG
CCGACTCCCT CGCTCGACGA CGCCAACCGT GAGCTCATCC GCCGGGCAGC CCGGTCCCAC
GGGGTGGCGA GCGTCCAGGA CCTGCGCGAC TACTACCGCA TGGAGGTCGC GCCCGCCGCT
CGGGCCGTCG CCGAGCTGGT CGAGGAGGGT GAGCTGCTGC CGGTCGCCGT CGAGGGGTGG
CGGCGCCCGG CCTACCTGCA CCGCGACGCC CGGCTGCCGC GGCGGGTCCG GGCCCGGGCG
CTGCTGAGCC CGTTCGACCC GGTGGTGTGG GAGCGCACCC GCACCGAGCA GCTGTTCGGC
TTCCGCTACC GCATCGAGAT CTACGTACCG GAGCCGCAGC GGGTGCACGG CTACTACGTG
CTGCCGTTCC TCCTCGGCGA TCGGCTCGTC GGGCGGGTCG ACCTGAAGGC CGACCGCCAG
TACGACGCCG GGGCCGGCCG GTTGCTGGTC AAGGCGGCGT ACGCCGAGCC GGACGCTCCC
GCGGAGACCC CCGAGGAGCT CGCCGCGGAG CTGGCCGCGA TGGCGGGCTG GCTCGGGCTG
GGCTCGGTCG TCGTGGAGCC GCGTGGCGAC CTGGCCCCCG CGCTCAGCCG GTTCATTTAG
 
Protein sequence
MESLSNAQAR RVALAAQGFL DPRHTIPTMR TFQRTLERTG VLQVDSVNVL QRAHYMPVFS 
RIGRYDVELL RRAAERRPRR MVEYWAHVQA YMPVELWPVM QHRMAAYRQK RGKWGFVVGD
DGLEQSLLEE IRERGASTAR DLDDGLPRDK THWGWNWSET RKVLDYLYMS GAVAIADRNT
QFEIRYDLPE RVLPAEVLAQ PTPSLDDANR ELIRRAARSH GVASVQDLRD YYRMEVAPAA
RAVAELVEEG ELLPVAVEGW RRPAYLHRDA RLPRRVRARA LLSPFDPVVW ERTRTEQLFG
FRYRIEIYVP EPQRVHGYYV LPFLLGDRLV GRVDLKADRQ YDAGAGRLLV KAAYAEPDAP
AETPEELAAE LAAMAGWLGL GSVVVEPRGD LAPALSRFI