Gene Noca_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1422 
Symbol 
ID4597329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp1507194 
End bp1507859 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID639776020 
ProductGntR family transcriptional regulator 
Protein accessionYP_922623 
Protein GI119715658 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0669169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCGT TGGAACCGAC GAACCATCGT CAGGCCCCGA ATCGAGCGGC CGAGGTCTAT 
GAACAGCTGC GTCAGGCCAT CGTGGATGGC TCGATCCGTC CGAACGAGCG CCTCATCGAG 
GCCGATCTGG CCGAGCGCCT CCAGGTCAGC CGAACGCCCG TGCGCGAGAC CATGCTGCGG 
CTCGCCGGCG ACGGCCTGAT CGTCAATCAT CGCCGGGGCT GGGTCGTGCG GGAGCACTCG 
CCCGATGAGA TCCGCGAGGT CTACGAGGTG CGTGCCGCGC TGGAGGGGTT CGCCGCGAGG 
CTGGCCGCCG AGCGCGCCAC GGACGACGAG CTCGAGCAGA TCGCGGCGAA CCACCGCGAC 
TACACCGACA CCGTCCGGGG ATCTGCCCGC GGCCAGCTGG TCGAGCACAA CGACGCGTTC 
CACGATGCGG TGATCAACGC TGCGCGTAAC GCCCTCCTCG CGCAGCGGAT ACGGGACAAC 
AGCCAGTACT ACTTCATCCA CCGCATCGCG GGCTTCCTCT CCGACGAGGA AGTCCGGTCC 
TCGATCGCGG GGCACGAGAA CCTGGTGCAG GCGCTGCATG CCCGGGACGC CGATCGTGCC 
GAGCGGGTCG CCCGGGAGAA CGTGACCGAG GGCCTGCGCA AGGTGCTCGA CCGGCTGCCT 
CGCTGA
 
Protein sequence
MTPLEPTNHR QAPNRAAEVY EQLRQAIVDG SIRPNERLIE ADLAERLQVS RTPVRETMLR 
LAGDGLIVNH RRGWVVREHS PDEIREVYEV RAALEGFAAR LAAERATDDE LEQIAANHRD 
YTDTVRGSAR GQLVEHNDAF HDAVINAARN ALLAQRIRDN SQYYFIHRIA GFLSDEEVRS 
SIAGHENLVQ ALHARDADRA ERVARENVTE GLRKVLDRLP R