| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1407 |
|---|
| Symbol | |
|---|
| ID | 4597314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1488633 |
|---|
| End bp | 1489712 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639776005 |
|---|
| Product | mannose-1-phosphate guanylyltransferase (GDP) |
|---|
| Protein accession | YP_922608 |
|---|
| Protein GI | 119715643 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0836] Mannose-1-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCCG TCGACAACTT CTGGGCCGTG ATCCCGGCGG GTGGGGCCGG CACGCGGCTG
TGGCCGCTGT CCCGCTCCTC GAGCCCGAAG TTCCTCCACG ACCTGACCGG GCAGGGCCGG
ACCCTCCTCC AGGGGACGCA CGACCGCCTG GCCCCGCTGG TCGCCGACCG CTTCGTCGTC
GTGACCGGCG CGGCCCACCG CGCCGCCGTG CTCGAGCAGC TCCCGGAGGT GTCGCCCGAG
CGGGTGCTGG GGGAGCCGGC TCCGCGTGAC TCGATGGGCG CGATCGGGCT CGCGGCGGCG
GTGCTGGAGC GGGAGGACCC CGACGCGGTG ATGGGTTCGT TCGCGGCCGA CCACGTGATC
CCGGACCGGG CGGCGTTCGC CGAGGCGGTG CGGATCGCGG CCGAGGTGGC TCGCGACGAC
TGGCTGGTGA CCCTCGGCAT CCAGCCGGTG TTCCCCTCCT CGGCCTTCGG CTACATCCAC
CTGGGCGACC CGCTGGCCGG CCATGCCGGG GCGAGCGCCG TACGCGAGTT CGTCGAGAAG
CCCTCGGTGC GCACCGCGAC CGAGTACGTC GCCACCGGCC GCTACCGCTG GAACGCGGGC
ATGTTCGTGG TCCGTCCGAC CGTGCTGCTC GACCTACTGG CTACCTGGCA CGCCGAGTTC
GCCGGGGCGC TGCGCGCGAT CGCCGCCGAC CCGGCACGGC TCGAGGAGCT CTGGCCGGGG
CTGCCGAAGA TCGCGCTCGA CCACGCCGTG GCGGAGCCGG CGGCCGCCGC CGGTCGGGTC
GCATGCGTGC CGTCGTCCTT CCACTGGGAC GACGTCGGCG ACTTCGACTC GCTGGCGGCC
CTGCTGGGAA CGACCGCCAC GGCGACCACG ATCCTCGGCG ACGCCGACCT GGTCCGGGTC
GTCGACGCCA GCGGGCTGGT GGTCCCGGGC TCCGGCCGAA CGATCGCCGT CGTCGGCCTC
GACGACGTGG TGGTCGTCGA CACCCCCGAC GCGGTGCTCG TCACGACCCG CTCCCGGGCC
CAGGAGGTCA AGCAGGTCGT CGAGGCGCTC AAGGCCGACG GGCGCGCCGA CCTGACCTGA
|
|---|
| Protein sequence | MAAVDNFWAV IPAGGAGTRL WPLSRSSSPK FLHDLTGQGR TLLQGTHDRL APLVADRFVV
VTGAAHRAAV LEQLPEVSPE RVLGEPAPRD SMGAIGLAAA VLEREDPDAV MGSFAADHVI
PDRAAFAEAV RIAAEVARDD WLVTLGIQPV FPSSAFGYIH LGDPLAGHAG ASAVREFVEK
PSVRTATEYV ATGRYRWNAG MFVVRPTVLL DLLATWHAEF AGALRAIAAD PARLEELWPG
LPKIALDHAV AEPAAAAGRV ACVPSSFHWD DVGDFDSLAA LLGTTATATT ILGDADLVRV
VDASGLVVPG SGRTIAVVGL DDVVVVDTPD AVLVTTRSRA QEVKQVVEAL KADGRADLT
|
|---|
| |