| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1405 |
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| Symbol | |
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| ID | 4597312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1484953 |
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| End bp | 1487832 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639776003 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_922606 |
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| Protein GI | 119715641 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5479] Uncharacterized protein potentially involved in peptidoglycan biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCCCA GCAGGACCAC CTTCGTCACC GCCTGTCAGC AGCTGCTGGC ACTCGGTGTC
GTGCTCGCCG CACTGACCCC CGCGGCCAGC GTCATCAGCC TCGACGTCGT CCGTGAGCTG
CCGACCGGCG CCGCCGGTCA GGACCCGCTC GCCGCCGACC TGTCCGCCTA CACCCGAGCC
AGCCGGCGGC CCTCGAAGGT GCCCACCGAG GCGGTCGACC CGACGGTCAC CGAGTACTCG
CTCACGGCGC CCGCCGGGGC CAAGGCCGCC CCCCGGGGCG TCAGCAGCCG GACCAAGGCC
GGCGCCCTCG GCGGCGGCGA GGTCACCAGC GTCCCCGAGG CGGTCGTCGG CTACGGCGCG
GTCGGCGTCA CCTGGGCCCA TGGGACCGAG CTGCCCGAGG ACGCGATCAG CCTCGCCGTG
CGGACCCGCA CCGGCGCGAG CTGGTCGTCG TGGATGGACC TCGAGTACGA CGTCGAGCAC
GGCCCCGACC CGGGCAGTGT CGAGGCCCGC CACGCGCGCC CCGGCACGGA CGCGCTGCTC
GTCGGCGACG TCGACCAGGT GCAGGTCCGC GCGTCCTCGA CCGGCGCGCT GCCCCCGGAC
CTGCGGCTGG CCGTGGTCGA CCCCGGCACC GCCGCGCGGA CCGCGGTCGA GAAGCCGGCG
CTCGACACCA ACACCATGGA CGACGCCCCC GGCGCCACGA CCGGCGCCAC GTCGGTGCAG
CCTGGTGCGT TGGCGACCGA CCCCGGCGAG GGCACCGACG GCGGCGACGA GATCGACCTG
CAGGCCGCGA CGTACACCCC GCGCCCGACG ATCTACTCGC GCGCCCAGTG GGGGGCCGAC
GAGCGGATGC GGGAGAAGAG CTCACTGCGC TACTTCGAGG TGCACGCCGG CTTCGTGCAC
CACACGGTCA ACGCGAACGA CTACTCCCGG GCCGAGGTCC CCGGGATCAT CCGCAGCATC
TACGCGTACC ACACGCAGTC CCGCGGCTGG TCAGACATCG GCTACAACTT CCTCGTCGAC
CGGTTCGGCA GGATCTGGGA GGGCCGGTAC GGCGGCATCG ACCGCCCCGT GGTCGGCGCC
CACACCCTGA ACTACAACGA GTACTCCTTC GCGATGTCCG CGATCGGCAA CTACGACGTC
AAGCAGCCCT CGCAGGCGAT GGTCCAGGCC TACGGCGCCC TGTTCGCGTG GAAGCTCTCG
CTGCACGGGG TGGACGCCTC CTCGACCAGG CAGTGGGTCG GCTCGAAGTT CTTCGAGGCC
ATCAACGGCC ACCGCGACGC CGCGGCGACC GCGTGCCCGG GCAAGTACCT CTACGCGAAG
CTGCCGGAGA TCCGGCGGCT CGCCGCCGAG GCCCAGCAGG GTTGGGCGGG CCGGGAGCTG
GAGTCCGACC TGGCGTCGAC CCCGCACCCC GACCTGATCG TCCGTCGCGC CAGCGACGGC
CAGGGCTTCG TGATCCCGAC CGGCGGGCTG ACCGGCTTCG GCAAGGGTGT CACCGCCCTG
ACCGGCCTGC TGTCCGGGGA CACGGTGCTC GCCTCACCGG ACCTGACCGG CGACGGCATC
GCCGACCTGG TCGTGCGGTC CGCGGACGGC GTCGCGCGGG TCCGTCCCGG CGCCGCCGAC
GGGACGTTCG GCGCCCCGGT CAAGCAGTTC CGCTCGCTGG CCGGCCGGGA CCTGCTCACG
GCGGTCGGCG ACCTCAACGG CGACGGTCGC AACGACCTGG TCGCCCGCTG GCCCGAGACC
GGGCGTCTGG ACACCTACCT CGGGCGTGGG GACGGGGGCT TCAAGCTGAT CCGCCGCGGG
ACCGCCTGGG GCCGCTACAC GATGCTCGTC GGCGCGGGCG ACCTGACCGG TGACGGCCGG
GTCGACCTGC TGGGCCGCGA CGCCGATGGG GCCCTGTGGC TGCACCGGGG CCGGGCCAAG
GGCGGCTTCG GTGCCCGGGT GCAGGTCCCC GGCGCGTGGG ATCGCTGGTC GACGATCACC
GGCATCGGCG ACGTCACCCG CGACGGTCGC AACGACCTGT TCGTCCGCGA CGGCTCGTCG
GGCAACGGCT TCGTGGTCCC GGCCACCGGG GACGGTTCCT TCGGGCTGCC GTTCGGGCCG
GTGACCAGGG TGCGGTCCGT GGGCAGCCTG GTGGGTGCCG CCCAGGTGCT CGGCGACGCC
ACCGCCGACG TGATCGCGCG CAGCGGCCGA CGGGTCGTGG TCTACCCCAA CAGCGGCGGC
TTCGAGACCG GCAAGCCGAT CCCGACCGGC GCCGACCTGT CCAACGTGAA CCTGGTCCTC
AACGCGGGTG ACTGGGACCG CGACGGGTTC GGCGACATCG TGAACCGGAA CACGAAGACC
GGCGCGCTCT TCGTGCGCCG CGGCGACGGC ACCGGTCACT TCGAGCGGCC CGTCAAGATC
GGCACCGGCT TCAAGGCCGT CGGGCTGCTC GCAGCTGTGG GCGACATGAC CGGTGACGGC
TACCCGGACC TGATGGGGCA GCCGACGGGC AGCGCGATGC GGATCTACCC CGGCAACGGG
CTGGCCGGGC TGAAGCCCAG CTACGTCGCG CACGGGCGGA TCGCCGCCGG CCGGCAGGTG
CCGGTCGGGC GGTGGGACGG TGACGGCGCG CCGGACTCGC TGTTCCGCAG CGGCGCGAGG
CTCACCCTGT TCCCCGGCAA CGGCCCCGGT GGCTTGACCG ACCCCAAGAG GCTCGGACTC
GACCTGACGC CGTACGACTG GGTGATCGGG GTCAGCGACG TGCTGCTCAC CGGGCACCCG
GACCTGGTCG TGCGCGAGAA GGCGACCGGC TACCTGTGGC TGCTCCAGGG CACCGCGACC
GGCTTCAAGC CGCGGCGCTT CCTCGCCGAG GGGATGGGGG AGTACGACCT GGCCGGCTAG
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| Protein sequence | MPPSRTTFVT ACQQLLALGV VLAALTPAAS VISLDVVREL PTGAAGQDPL AADLSAYTRA
SRRPSKVPTE AVDPTVTEYS LTAPAGAKAA PRGVSSRTKA GALGGGEVTS VPEAVVGYGA
VGVTWAHGTE LPEDAISLAV RTRTGASWSS WMDLEYDVEH GPDPGSVEAR HARPGTDALL
VGDVDQVQVR ASSTGALPPD LRLAVVDPGT AARTAVEKPA LDTNTMDDAP GATTGATSVQ
PGALATDPGE GTDGGDEIDL QAATYTPRPT IYSRAQWGAD ERMREKSSLR YFEVHAGFVH
HTVNANDYSR AEVPGIIRSI YAYHTQSRGW SDIGYNFLVD RFGRIWEGRY GGIDRPVVGA
HTLNYNEYSF AMSAIGNYDV KQPSQAMVQA YGALFAWKLS LHGVDASSTR QWVGSKFFEA
INGHRDAAAT ACPGKYLYAK LPEIRRLAAE AQQGWAGREL ESDLASTPHP DLIVRRASDG
QGFVIPTGGL TGFGKGVTAL TGLLSGDTVL ASPDLTGDGI ADLVVRSADG VARVRPGAAD
GTFGAPVKQF RSLAGRDLLT AVGDLNGDGR NDLVARWPET GRLDTYLGRG DGGFKLIRRG
TAWGRYTMLV GAGDLTGDGR VDLLGRDADG ALWLHRGRAK GGFGARVQVP GAWDRWSTIT
GIGDVTRDGR NDLFVRDGSS GNGFVVPATG DGSFGLPFGP VTRVRSVGSL VGAAQVLGDA
TADVIARSGR RVVVYPNSGG FETGKPIPTG ADLSNVNLVL NAGDWDRDGF GDIVNRNTKT
GALFVRRGDG TGHFERPVKI GTGFKAVGLL AAVGDMTGDG YPDLMGQPTG SAMRIYPGNG
LAGLKPSYVA HGRIAAGRQV PVGRWDGDGA PDSLFRSGAR LTLFPGNGPG GLTDPKRLGL
DLTPYDWVIG VSDVLLTGHP DLVVREKATG YLWLLQGTAT GFKPRRFLAE GMGEYDLAG
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