Gene Noca_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1397 
Symbol 
ID4595870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1475702 
End bp1476220 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content73% 
IMG OID639775995 
Productthioesterase superfamily protein 
Protein accessionYP_922598 
Protein GI119715633 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACCGG ATCCGGACCT GCACGGCCTG CCGCCGTCCT ACGCGCGCGT CTCGCTGGCG 
ATCGTCACCT CCAGCGCGGA GGCGAACCTG CTCGGCAACA TCCACGGCGG CGAGATCGCG
AAGCTGGCCG ACTCGACCGC GGGCGCCGTC GCGGCACGGC ACAGCGGAGG GCCCGCGGTC
ACCGCGGTCA TGGACGAGAT GGCGTTCCTG GAGCCGGTGC ACGTGGGCGA CATCGTCCGC
ACCCTGGCCC AGGTCAACTG GGCCGGGCGG TCCTCGATGG AGATCGGCGT GCGGGTCGAG
ACCCAGCCGT GGAACGACCC CTCGACGACG TCGCTGCACG TGGCGTCGGC GTACTTCGTG
TTCGTCGCCA TCGACGGCGC CGGGCGGGCG CGCCGGGTGC CGGGACTGGT GCCTGAGACG
CCCGACGAGG TCCGCCGGAT GCGGGAGGCC GAGATCCGAC GGGCGAACCG GCTCGCGCGA
CGTGAGCAGA TCGAGGCCGG GCGCCTTCCC GGCGGCTGA
 
Protein sequence
MAPDPDLHGL PPSYARVSLA IVTSSAEANL LGNIHGGEIA KLADSTAGAV AARHSGGPAV 
TAVMDEMAFL EPVHVGDIVR TLAQVNWAGR SSMEIGVRVE TQPWNDPSTT SLHVASAYFV
FVAIDGAGRA RRVPGLVPET PDEVRRMREA EIRRANRLAR REQIEAGRLP GG