Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1397 |
Symbol | |
ID | 4595870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1475702 |
End bp | 1476220 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639775995 |
Product | thioesterase superfamily protein |
Protein accession | YP_922598 |
Protein GI | 119715633 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACCGG ATCCGGACCT GCACGGCCTG CCGCCGTCCT ACGCGCGCGT CTCGCTGGCG ATCGTCACCT CCAGCGCGGA GGCGAACCTG CTCGGCAACA TCCACGGCGG CGAGATCGCG AAGCTGGCCG ACTCGACCGC GGGCGCCGTC GCGGCACGGC ACAGCGGAGG GCCCGCGGTC ACCGCGGTCA TGGACGAGAT GGCGTTCCTG GAGCCGGTGC ACGTGGGCGA CATCGTCCGC ACCCTGGCCC AGGTCAACTG GGCCGGGCGG TCCTCGATGG AGATCGGCGT GCGGGTCGAG ACCCAGCCGT GGAACGACCC CTCGACGACG TCGCTGCACG TGGCGTCGGC GTACTTCGTG TTCGTCGCCA TCGACGGCGC CGGGCGGGCG CGCCGGGTGC CGGGACTGGT GCCTGAGACG CCCGACGAGG TCCGCCGGAT GCGGGAGGCC GAGATCCGAC GGGCGAACCG GCTCGCGCGA CGTGAGCAGA TCGAGGCCGG GCGCCTTCCC GGCGGCTGA
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Protein sequence | MAPDPDLHGL PPSYARVSLA IVTSSAEANL LGNIHGGEIA KLADSTAGAV AARHSGGPAV TAVMDEMAFL EPVHVGDIVR TLAQVNWAGR SSMEIGVRVE TQPWNDPSTT SLHVASAYFV FVAIDGAGRA RRVPGLVPET PDEVRRMREA EIRRANRLAR REQIEAGRLP GG
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