Gene Noca_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1372 
Symbol 
ID4598539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp1449936 
End bp1450517 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content74% 
IMG OID639775970 
Productregulatory protein, TetR 
Protein accessionYP_922573 
Protein GI119715608 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0306025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACGA GCCCGCGCCG CCGCCAGCTC CTCGACGCCG CGCTCCACGT CATCGCCGAC 
GACGGGCTGC GCGGTCTCAC CCACCGAGCC GTGGACCGTC GTGCCGGACT TCCCGAGGGC 
AGCTGCTCCG CCTACTGGCG GACCCGCGCC GCGCTCCACG GCGCGCTCAC CGAGTACGTC 
GCGCAGAGTC TCCTCGGTGA CGTCGACGAG CTCGCGGAGC GGCTCCGGAC CGAGTGCGAG 
GGCGACGAGG AGAGCATCGA TGCCGCCCTG TCGCTGTTCC TGCACTGGCT CGATCAGCGC 
GAGCTGCTCG TCGCGCGCCT GGAGCTGAGC ATGGCGGCGA CCCGTGACTC CGGCCTGGCC 
GCGCTGCTCG CCGACCACCG GTCCCGACTG GTCACCCTGG TCGAGGGGAT CATGGCGACC 
TCGGGCAAGG GGTACGCCCG CGACCGCGCC GAGACCCTGG TGGCGTCGTA CGACGGCGTC 
CTGCTCGCGG CGCTGCTGCG ACCGCCCGCC AGCCGACGGG AGTTCCTGAC CCGCTCGCTC 
GAGCTCCTCG GCGAGCAGCT CGGGGGCGAG CCCGCGGCGT GA
 
Protein sequence
MSTSPRRRQL LDAALHVIAD DGLRGLTHRA VDRRAGLPEG SCSAYWRTRA ALHGALTEYV 
AQSLLGDVDE LAERLRTECE GDEESIDAAL SLFLHWLDQR ELLVARLELS MAATRDSGLA 
ALLADHRSRL VTLVEGIMAT SGKGYARDRA ETLVASYDGV LLAALLRPPA SRREFLTRSL 
ELLGEQLGGE PAA