| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1367 |
|---|
| Symbol | |
|---|
| ID | 4598534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1443732 |
|---|
| End bp | 1445399 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639775965 |
|---|
| Product | putative ABC transporter |
|---|
| Protein accession | YP_922568 |
|---|
| Protein GI | 119715603 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0486] Predicted GTPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.621246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCT TGCTCGAGGG GGCCAAGAAG CTGGTCACCC GTGGTACCGA CATCGGTGCC
CGCATCGAGG GTCTCGACGC GGCGACGTAC GCCGCGCGCG GCCGGCTCGA CGACGGGCTC
GTCACCGAGG CGCAGGCGGT CGTCGACCGC GCCACCGGGC GGCTGCGGCT CTCGGCGACC
CACACGGTGG TCGCGATCGG TGGCGCGACC GGCTCGGGCA AGTCCTCGAC GTTCAATGCC
CTCACCGGCC TCGAGCTGTC CGCCGTCGGC GTACGCCGGC CGACCACCTC CTGGGCGTCC
GCCTGCGTGT GGGGACGCGA CGGTGCCGAG GAGCTGCTCG AGTGGCTGGG CATCCCGCCG
CGGCACCAGA CCACGCGGGA CTCGATGCTC GACTCCGGGC GGCGCGGCGC CGACTCCGAG
CTCGACGGGG TGGTGCTCCT CGACCTGCCC GACCACGACT CGACGGAGGT CGCGCACCAC
CTCGAGGTGA ACCGCCTGGT CGACCTCGCG GACCTCCTGG TCTGGGTCCT CGACCCGCAG
AAGTACGCCG ACGCGGCCAT CCACGACCGC TACCTCGCGC CGTCCGCGGA GCACCAGGAC
GTGATGCTGG TCGTCTTGAA CCACATCGAC ACGGTGCCGG AGGAGCGCCG CCAGTCGATG
CTCGACGACG TACGCCGGCT GCTCGACGCC GACGGTCTCG ACCGGGTGCC GGTGCTCCCG
GTCAGCGCCC GGCACGGCAT CGGCATCCCC GAGCTGCGGG CCGAGATCGC CCGACGGGCC
GGCGAGAAGC GTGCCACCCG GTCGCGGATC GACGCGGACG TGAAGGCCGC CGCCAGCGAG
CTGTCGGCTG CCTCCGGCGA GGCCCCGACC CGGGTCCTGG CACCGGAGCG GGTGACCGCC
CTCGACGACG CCTTCGCCGA GGCCGCGGGC GTGCCGACGA TCGTCGACGC CGTGGAGCGC
TCGACCCGGA TGCGGCTGGG TCGCGCCACC GGCTGGCCCG TGCTCACCTG GATCTCGGGG
ATCAAGCCGG ACCCGCTGCG CCACCTCGAC CTCGACGCGG ACGCCGAAGG CCGCCAGCTC
TCGGGCCGCC AGCTCGCGGG TGGTCGCGCG ACCACGCCGC AGACGGCGCA GGTGCAGCGC
GCCCGGGTCG ACACCGAGGT GCGCACCCTC GCCGACGACG TCTCCAGCGG CCTCGCCCAT
CCGTGGGTCG AGGCGGTGCG CCGCGCGTCG GTCTCACGGC TCGACGAGCT GGGTGAGCGG
CTCGACGCCG CGCTCGCCGG CGCCGAGGTC GGCGCGGCCC GGCTGCCGTT CTGGGCCGGC
GTGGTGCGGG TGCTCCAGTG GCTGCTGCTC CTCGCCAGCC TCGCGGGACT GGTGTGGACG
GGCGTGCTCG CCGGCTCCGG CAAGCTCCAG GATGCCGACA CCCCGCAGGT CGCCGGGGTG
GCGCTCGCGC TGGTGCTCCT GGTCGGCGGG ATCGGCCTCG GGCTGCTCCT CGCCCTGGTG
AGCCGGATCG GGGTCGCCGG GGCCGCGCGC CGGCGCGCGG AGGCGACCGA CGAACGCCTC
CGCGGGGCGG TCGCCGAGGT CTCGCACGAG CTGGTCGTCG ACCCGGTGGA GATCGAGCTG
GCCGCCTACA CGGCGGTCCG CAACGGCCTG GCCCGCGCGC TCGCCTGA
|
|---|
| Protein sequence | MTSLLEGAKK LVTRGTDIGA RIEGLDAATY AARGRLDDGL VTEAQAVVDR ATGRLRLSAT
HTVVAIGGAT GSGKSSTFNA LTGLELSAVG VRRPTTSWAS ACVWGRDGAE ELLEWLGIPP
RHQTTRDSML DSGRRGADSE LDGVVLLDLP DHDSTEVAHH LEVNRLVDLA DLLVWVLDPQ
KYADAAIHDR YLAPSAEHQD VMLVVLNHID TVPEERRQSM LDDVRRLLDA DGLDRVPVLP
VSARHGIGIP ELRAEIARRA GEKRATRSRI DADVKAAASE LSAASGEAPT RVLAPERVTA
LDDAFAEAAG VPTIVDAVER STRMRLGRAT GWPVLTWISG IKPDPLRHLD LDADAEGRQL
SGRQLAGGRA TTPQTAQVQR ARVDTEVRTL ADDVSSGLAH PWVEAVRRAS VSRLDELGER
LDAALAGAEV GAARLPFWAG VVRVLQWLLL LASLAGLVWT GVLAGSGKLQ DADTPQVAGV
ALALVLLVGG IGLGLLLALV SRIGVAGAAR RRAEATDERL RGAVAEVSHE LVVDPVEIEL
AAYTAVRNGL ARALA
|
|---|
| |