| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1366 |
|---|
| Symbol | |
|---|
| ID | 4598533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1441940 |
|---|
| End bp | 1443658 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639775964 |
|---|
| Product | putative ABC transporter |
|---|
| Protein accession | YP_922567 |
|---|
| Protein GI | 119715602 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTCT CCCGCGACGA GAGCGACCCG ATGGACACCC GGATGCTGAC CGCCCTGGTG
CAGCTGCGTG GTGCCCTGCA GGCCGCGCGG CTGCCGCTGG AGGTCGCCGG GGTCGAGGAG
CGGCGTACGT CGCGGCAGCA GATGATCGAC CAGCTCGAGG ACTACGTCAT CCCGCGGCAG
ATGACGGTCG ACGCACCCCT CCTGGTCGTC GTCGGTGGCT CGACCGGGGC CGGCAAGTCG
ACCTTGGTGA ACTCGCTGGT CGGCCGCCGG GTCACGGCCT CCGGCCTGCT GCGACCCACC
ACCCGCTCGC CCGTGCTGGT GCACCACCCC GACGACGCGA CCTGGTTCGG GCAGGACCGG
CTGCTGCCGG ACCTGGTGCG CACCGACCGC ACCACCGACG ACCCGCACGC GCTGCAGCTC
GTGGCCTGCG AGACCGTGCC CGAGGGGCTC GCGATCCTCG ACGCCCCGGA CGTCGACTCG
GTCGAGGAGC ACAACCGGAC GATCGCGGCC CAGCTGCTCG CAGCGGCCGA CCTGTGGCTG
TTCGTCACCT CGGCGGCGCG CTACTCCGAC CAGGTGCCCT GGGACTACCT GCGCCAAGCC
GCCGAGCGGT CGACGGCGGT CGCCGTCGTG CTCGACCGGA CGCCCGCCGA CGCCGTGCAG
ACCGTGGCCG CCCACCTGGC CCGGATGCTC GCCAGCCGTG GCCTGAAGGA CTCGCCGCTG
TTCACCGTCA ACGAGGCGCC GATCTCCGAG GCCGGGCTGC TCGCGGCGGC GGAGGTCGCC
GAGATCCGGG GCTGGCTGGT CTCGCTCGCC GAGGACGGGG ACGCGCGCGC CCTGGTGGTC
CGGCAGACCC TGGACGGCAC GATCCGGACC CTGGGCCGGC AGACCTACCA GATCGCCGAC
GCGGCCGTCG CCCAGCTCGA GGCGGTGGCC GACCTGCGCG CTCTGACGGC CGAGGCGTAC
GACGCGGCCG CGGCCGGGCT CGTCGCGGAG TCCGGCGACG AGACCCTGCT GCGCGGGGAG
GTCCTGGCCC GGTGGCAGGA GCTGATCGGC ACCGGTGAGC TGCTGCGCAG CCTGGACAAC
CGGGTCGGCC GGCTGCGCGA CCGGGTCGTC AGCGCGGTCA AGGGCACGCC GCAGCAGGCC
GACCGGGTGC TGGTGGCGGT CGAGGCCGCC GCCGAGGCGC TGGTGCTCGA TCACGCCGAG
TCGGCAGCCG CACGGGTGCA CGCCGCCTGG ACGGAGTCCG AGGCGGGGCG GGGGTTGCTG
GCCGGTCGCG ACGACCTCGG CAGGGCCGCG AGTGACCTGC GGCGCCGGGC GGAGTCGGAG
GTGCGTGCCT GGCAGGAGGA GGTGCTCGAC CTGGTGCGCG CCGAGACCGC CGACAAGCGC
ACCAGCGCCC GCTTCCTCGC CTACGGCGTG CACGGCCTGG GCGTCGCGCT CATGGTGGCG
ACGTTCCGGC GGGGCGCGCC CGTGGTCGAC GACCTCGGCC GCACGCTGCT CGACGCGGTG
CTCGGTGGCG CGACCGTCGA CTCCCTGGTC GAGCGCGCGG GGGCCTCGCT CGAGCGGCGG
CTGACCGGGC TCGCCGAGAG CGAGCGTGCT CGGTACGCCG CGGTCCTCGA CGGTCTCGAC
CTGCCCGCGG ACGCTCCCGA CCGGCTGCGG GCGGCCTCGC GCCGCATCGA TGACCGGAGG
TTCGAGCAGG CTCGGGCGGG AGTCGAGCCC ACGTCGTGA
|
|---|
| Protein sequence | MSLSRDESDP MDTRMLTALV QLRGALQAAR LPLEVAGVEE RRTSRQQMID QLEDYVIPRQ
MTVDAPLLVV VGGSTGAGKS TLVNSLVGRR VTASGLLRPT TRSPVLVHHP DDATWFGQDR
LLPDLVRTDR TTDDPHALQL VACETVPEGL AILDAPDVDS VEEHNRTIAA QLLAAADLWL
FVTSAARYSD QVPWDYLRQA AERSTAVAVV LDRTPADAVQ TVAAHLARML ASRGLKDSPL
FTVNEAPISE AGLLAAAEVA EIRGWLVSLA EDGDARALVV RQTLDGTIRT LGRQTYQIAD
AAVAQLEAVA DLRALTAEAY DAAAAGLVAE SGDETLLRGE VLARWQELIG TGELLRSLDN
RVGRLRDRVV SAVKGTPQQA DRVLVAVEAA AEALVLDHAE SAAARVHAAW TESEAGRGLL
AGRDDLGRAA SDLRRRAESE VRAWQEEVLD LVRAETADKR TSARFLAYGV HGLGVALMVA
TFRRGAPVVD DLGRTLLDAV LGGATVDSLV ERAGASLERR LTGLAESERA RYAAVLDGLD
LPADAPDRLR AASRRIDDRR FEQARAGVEP TS
|
|---|
| |