Gene Noca_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1365 
Symbol 
ID4598532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1440810 
End bp1441943 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content73% 
IMG OID639775963 
Productputative integral membrane protein 
Protein accessionYP_922566 
Protein GI119715601 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGGAG CCCGCCGCGA CCGTGCGACC TCGTCGGTCG CGTTCGCGGT CGTGGTGACC 
GTGCTCGTGT GTCTCGGCGC GCTCGCGATC CTGGCGCTGC TGGCCTTCTC CGGCGCCCCC
GGGTCCCTGG CCCTGGCCAC CGTGCTGGCG GCGCTGCCGG TGGGCCCGCT CGTGGCCTGC
TACCTCTGGC TGGACCGCTA CGAGCCGGAG CCGCGCACCC TGCTCGCGGC CGGCCTGCTC
TGGGGCTGCT TCGTGGCCAC CGCGGCCGCC CTGCTCATCC AGGGCGTCGG GGGCTTCGTC
CTCTCCTTCA CCGACAACCA GAGCCTCGCC GTCGTCGCGC CGGTCACCGA GGAGGCCAGC
AAGGGGATCT TCCTGCTGCT GCTCCTGTGG TGGCGCCTGG CCGAGCTGGA CGGCGTGCTC
GACGGCATCG TGTACGCCGG CATGGTCGGC ATCGGCTTCG CCTTCACCGA GAACATCCTC
TACCTGGCCG CGGCGTACAA CGGCACCGAC GGCGCGGGGC CGGGCGGCAC CGAGGCGCTC
ACCGCGACGT TCGTGGTGCG CTGCCTGTTC AGCCCGTTCG CCCATCCCCT GTTCACGGCG
TTCACCGGCA TCGGGGTCGG ACTCGCCGTC AACGCCCGCA GCCGGCCGGC CCGCATCCTG
TGGCCGCTGG GCGGGTACGC GGGTGCTGTG GTCGCGCATG CCGTCTGGAA CACCTCCACG
GTCTACGGCT TCGACAACTT CGTCATCGCG TACGTCGTGC TGATGGCACC CGCCTTCGTG
GCGCTGACCG GCCTCGCGGT GTGGGTGCGC AGCTCCGAGC GTCGGGTTCT CGCCGCCGCC
CTCACCGACG CCGCGCGTCG AGGGCTGGTG CCGGCGACCG ACATCGGCTG GGTCGTCGAC
CTCGGGGCCC GCAGGCGCAG CCGCGCCTAC GCGCGCCAGC TGGGCGGCCG GCCGGCGGAG
CGCGCGGTGC GCGACTACCA GCAGGCCGCC ATCGAGCTCG GGTTCTTGCA CTACCGCTTC
CTGCGCGGCA CCCCGCCGCC CGACTACGCC GAGCGCGGAC AGCAGTTCCT CCAGCGGATC
GCGGCCCTGC GGCCGTCGAT CGCCTTCCCC GGACAGGTGG TACCGACCAG ATGA
 
Protein sequence
MPGARRDRAT SSVAFAVVVT VLVCLGALAI LALLAFSGAP GSLALATVLA ALPVGPLVAC 
YLWLDRYEPE PRTLLAAGLL WGCFVATAAA LLIQGVGGFV LSFTDNQSLA VVAPVTEEAS
KGIFLLLLLW WRLAELDGVL DGIVYAGMVG IGFAFTENIL YLAAAYNGTD GAGPGGTEAL
TATFVVRCLF SPFAHPLFTA FTGIGVGLAV NARSRPARIL WPLGGYAGAV VAHAVWNTST
VYGFDNFVIA YVVLMAPAFV ALTGLAVWVR SSERRVLAAA LTDAARRGLV PATDIGWVVD
LGARRRSRAY ARQLGGRPAE RAVRDYQQAA IELGFLHYRF LRGTPPPDYA ERGQQFLQRI
AALRPSIAFP GQVVPTR