Gene Noca_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1351 
Symbol 
ID4598517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp1429063 
End bp1429731 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content70% 
IMG OID639775948 
Productoligoribonuclease 
Protein accessionYP_922552 
Protein GI119715587 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGAAC GACTCGTCTG GATCGACTGC GAGATGACGG GCCTGGATCT GCGGGCCGAC 
GCGCTGATCG AGGTGGCCGC GCTGGTCACC GACTTCGACC TCAACGTGCT CGGGAGCGGC 
GTCGACCTGA TCGTCAAGCC ACCCGCGGAG GCCCTCGACC AGATGAACGA GTTCGTCCGG 
GACATGCACG AGAAGTCCGG GCTGCTGCGC GAGCTGGACT CCGGCATCTC CCTCGACGAG 
GCTGAGGAGC AGGTGCTGGC CTACGTCAAG GAGTTCTGCC CCGACGGCAG CCGCCCGCCG 
CTGGCCGGCA ACACCGTGGC GACCGACCGG GCGTTCCTCG CCCGGGACAT GCCGAACCTC 
GAGACGTTCC TTCACTACCG GATCGTCGAC GTGTCCTCGA TCAAGGAGCT CTCGCGCCGG 
TGGTACCCCC GCGCGTACTT CCAGGCGCCG GCCAAGCGCG GGAACCACCG GGCACTCGCC 
GACATCCAGG AGAGCATCGA GGAGCTGCGC TACTACCGCG ACGCCGTGTT CGTGCCCTCC 
CCCGGCCCCG ACAGCGACGC GGCGCGCGCG ATCGCGCTCA AGCACGGCGG CTCGCTCACC 
GGGCTCTCCG GCGACGAGGC CGTGGAGACC GCGTCCGGCC CGGGGGCCGA TTCTGCGGAT 
CAGCCCTAG
 
Protein sequence
MNERLVWIDC EMTGLDLRAD ALIEVAALVT DFDLNVLGSG VDLIVKPPAE ALDQMNEFVR 
DMHEKSGLLR ELDSGISLDE AEEQVLAYVK EFCPDGSRPP LAGNTVATDR AFLARDMPNL 
ETFLHYRIVD VSSIKELSRR WYPRAYFQAP AKRGNHRALA DIQESIEELR YYRDAVFVPS 
PGPDSDAARA IALKHGGSLT GLSGDEAVET ASGPGADSAD QP