Gene Noca_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1343 
Symbol 
ID4598508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1416026 
End bp1419028 
Gene Length3003 bp 
Protein Length1000 aa 
Translation table11 
GC content71% 
IMG OID639775939 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_922544 
Protein GI119715579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAGTTC ACTTCTCGAG GGCGGGCGCG CTTCGGCGCG GGGCCGGCCT CTTCTCGGCG 
GGGGCGGTCG TGGCCGGCCT CCTGGTCGGT ACGCCGGCCT CGGTCGGTGC CGCGGAGGCC
AAGCCCGCGG CGTCCGGATC GACCAGTCTC ACCGCAGGAC GCTACGTCGT GCTCCTGCGC
GAGCCCAGCG CGGCCCAGTA CGACGGGACC AACCCGCGGT TCGCGGCGAC GCGCGCCAGG
GGCGACCGCC AGTTCGACGC GCGCTCGCAG CGGGTGCGCA CGTACACCGC CCACCTGCGC
TCGGCGCAGC GCTCGATCGC GAGCTCCGTC GGCGCCGACG TCGACCAGAG CTACACGATC
GCGGCCAACG GGTTCTCGAC CGCCCTCACC CAGGAGCAGG CGCTCGACCT GTCCTCCGAC
CGGCGGGTGC TGCTGCTGCA GAAGGACCAG CTGGTCCACG CCGACACCTG GAACACCCCG
CGCTTCCTCG GCCTGACCGG CAAGCGGGGA GCGTGGGCCA CCCACGGCGG TCAGAAGAAG
GCCGGCGCCG GCATCGTGGT CGCCGACCTC GACTCCGGCA TCTGGCCCGA GGCGAAGTCG
TTCGCGGGCC CGGCGCTCAC CAGGAACCCG CAGACCAAGT GGCACATCAG CCGCATCGGC
ACCTCGACCC GGATGGACAA GGCCGACGGC GGCGTGTTCA CCGGTGAGTG CGAGCTCGGC
GAGGACTGGA CCGCCGACGA CTGCAACACC AAGCTGATCG GCGCCCGCTC CTACAGCGCC
GGCTACCTCG CGAGCGGGAA CGCGATCATC GACGCGGACT ACGCCTCGAC GCGCGACGGC
AACGGCCACG GCACCCACAC CGCCAGCACC GCCGCGGGCA ACATCGTCGA CCGGGTCAGG
ACCGAAGGCG TGGAGTTCGG GACGATCTCC GGCATGGCGC CCGCCGCCCG GATCGCGGCG
TACAAGGTCC TCTGGGCCCA GGACGACGGC ACCGCCTCCG GCGTCACCAG CGACATCGTC
GCCGCGATCG ACGACGCCGT CTACGACGGC GCCGACGTCC TCAACTTCTC GATCTCGGGC
GCGCTGGACA CGGTGGTCGA GGCCACCGAG GTCGCCTTCG AAGGTGCGGC CGAGGCCGGC
GTCTTCGTGG CCGCCTCGGC CGGCAACTCC GGTCCCGATG CCTCCACCGT GGCACACAAC
AGCCCCTGGC TGACCACGGT GGCCGCATCG ACCCACCACA ACTTCGAGAA CACCCTGGTG
CTCGGCAACG GCACCAAGAT CGTGGGCGCC TCGATCAACG ACAAGCGCGT CTCGTCGAAG
AAGCTCGTCG ACTCCGAGGC CTCGGGCGTC GCGGGCGGCG ACGACGCCGA CGCCAAGCTC
TGCGGCCCCG ACACGCTCGA CCCGGCCAAG GTCACCGGCA AGATCGTGGT CTGCACCCGC
GGCGTCTACG ACCGGGTGGC CAAGAGCGCC GAGGTCGCCC GCGCGGGCGG CGTCGGGATG
GTGCTCGCCA ACCCGACCGA GAACAGCCTG GACGCCGACT TCCACTCGGT GCCGACCGTG
CACATCACCA ACACCGACGC GGCCAAGGTG TTCGCCTACC TGGCCGCGCA GGGCAGCGCC
GCCACGGCGA CGATCGAGCC CGGCAACCTC ACCAAGAAGA CGACGCCGCT GCCTCAGATC
GCCGGCTTCT CCTCGCGCGG TGCGGCGATC GCGAACGACG CCGACCTGCT CAAGCCGGAC
ATCGCCGCAC CGGGTGTGAG CGTGCTCGCC GCGGTGGCGC CGCCGTCGAA CGAGGGACGC
GACTACGACC TCTACTCCGG TACGTCGATG GCCGCGCCGC ACATCACCGG CCTGGCCGCG
TTCATGCTGA GCGTGCACCC GACGTGGAGC CCGATGAAGG TCAAGTCCGC GATGATGACG
ACCGCTCACC GGGTCAAGGA CGCCGAGGGG AAGACCTCGA ACGACGTCCT CGCCGAGGGT
TCCGGTCAGG TGAGCCCGCG CCGGTTCTTC GACCCCGGCC TGTTCGTGAC CTCGACCCCG
CGCGAGTGGC TCGGGTTCCT CACCGGTCAG GGGCTGGACA CCGGCTACGC GGCCGTCGCG
GCGAAGGACC TCAACGGTCC CTCGATGGCC CAGGGCCAGG TGCCGTCGGC GACGTCGTTC
ACCCGCACCT TCACCTCGTC GATGGCGGGC ACCTGGAAGG TCTCGGTCTC GGTTCCCGGC
TTCGCGGCGG CCCCCAGTGC CACCAAGCTG GTGGCCAGCG GTGCTGGTGA CGTGGAGACG
CTGACGGTCG ACTTCACCCG GACGACCGCC CCGCTCCTCG AGTTCGCGAT GGGGTGGGTG
ACCCTGACCG GGCCGACCAC CGTGCGGATC CCGGTCGCGC TGCGCCCGGT GTCGGTCAAG
GCACCGGCCT CGGTCCAGGG CACCGGCACC GACGGCTCGG TGGAGGTTCC GGTCACCGCC
GGCGCCACCG GCGAGCTCCT TGTCGAGCCG ACCGGGCTGG CGAAGGCGCA GACCGCCGAC
AACACCGTGG CCGTGGCCGA CTTCCAGCTC GAGTGCGTCG AGATCGGCGC CGACAGCAAG
CTGGCCCGGT TCGACCTCGA CGCGGCCGAC GACACCGCCG ACCTGGACAT GTTCGTCTAC
TACTCGCCGA CGTCGTGTGA CCCCGACACG CTCGTGGCCC AGGTCGGTCA GTCGGCCAAC
CCGACGGCTG ACGAGTCGGT GACGGTCATG GCTCCGGACG CGGGCTTCTA CGTGATCGAG
GTCGACGGCT TCGCCGCCGG CGACGCCGGC GCACCGATGG CCTACCAGCT CCGGTCCTAC
GACCTGGGCC CGGCCGCGAC CCTGGGCAAC CTCACGGTGA CGCCCAACCC GGTCCCGGTC
GTCGCGCAGC AGGAGACGAC GTTCGACGTC AGCTGGTCCG GCCTCGACCC GGACGCGTCG
TACCTCGGCA TGCTCGAGTA CGACGGCGCC CTGGCTCCGA CGATGGTGGA GATCACCAGC
TGA
 
Protein sequence
MSVHFSRAGA LRRGAGLFSA GAVVAGLLVG TPASVGAAEA KPAASGSTSL TAGRYVVLLR 
EPSAAQYDGT NPRFAATRAR GDRQFDARSQ RVRTYTAHLR SAQRSIASSV GADVDQSYTI
AANGFSTALT QEQALDLSSD RRVLLLQKDQ LVHADTWNTP RFLGLTGKRG AWATHGGQKK
AGAGIVVADL DSGIWPEAKS FAGPALTRNP QTKWHISRIG TSTRMDKADG GVFTGECELG
EDWTADDCNT KLIGARSYSA GYLASGNAII DADYASTRDG NGHGTHTAST AAGNIVDRVR
TEGVEFGTIS GMAPAARIAA YKVLWAQDDG TASGVTSDIV AAIDDAVYDG ADVLNFSISG
ALDTVVEATE VAFEGAAEAG VFVAASAGNS GPDASTVAHN SPWLTTVAAS THHNFENTLV
LGNGTKIVGA SINDKRVSSK KLVDSEASGV AGGDDADAKL CGPDTLDPAK VTGKIVVCTR
GVYDRVAKSA EVARAGGVGM VLANPTENSL DADFHSVPTV HITNTDAAKV FAYLAAQGSA
ATATIEPGNL TKKTTPLPQI AGFSSRGAAI ANDADLLKPD IAAPGVSVLA AVAPPSNEGR
DYDLYSGTSM AAPHITGLAA FMLSVHPTWS PMKVKSAMMT TAHRVKDAEG KTSNDVLAEG
SGQVSPRRFF DPGLFVTSTP REWLGFLTGQ GLDTGYAAVA AKDLNGPSMA QGQVPSATSF
TRTFTSSMAG TWKVSVSVPG FAAAPSATKL VASGAGDVET LTVDFTRTTA PLLEFAMGWV
TLTGPTTVRI PVALRPVSVK APASVQGTGT DGSVEVPVTA GATGELLVEP TGLAKAQTAD
NTVAVADFQL ECVEIGADSK LARFDLDAAD DTADLDMFVY YSPTSCDPDT LVAQVGQSAN
PTADESVTVM APDAGFYVIE VDGFAAGDAG APMAYQLRSY DLGPAATLGN LTVTPNPVPV
VAQQETTFDV SWSGLDPDAS YLGMLEYDGA LAPTMVEITS