Gene Noca_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1330 
Symbol 
ID4598569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1399383 
End bp1400195 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content73% 
IMG OID639775925 
Productcobalt ABC transporter, ATPase subunit 
Protein accessionYP_922531 
Protein GI119715566 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.210867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTC CCGTCCTCGA CGTGCGCGGC CTGGCCTACG CCTACCCCGA CGGCCACCAG 
GCGCTCTTCG GCGTCGACCT GCACGTGCAC CGGGGTGAGC GGGTCGCGCT GCTCGGTCCC
AACGGCGCCG GCAAGACCAC CCTGGTCCTG CACCTCAACG GCATCCTGAC GGCGGGCGCC
GGGACGGTCG CCGTCAGCGG GCTGCCGGTC GAGAAGGCCC ACCTGGCCGA GATCCGGCGC
CGGGTCGGCG TCGTCTTCCA GGACCCCGAC GACCAGCTGT TCATGGGCAC CGTCCGCGCG
GATGTCGCTT TCGGACCCGC CAACCTCGGC CTGCGCGGTC CCGAGCTCGA CCGCCGGGTG
CTGCATGCGC TCGAACAGGT CGGCATGGCG GAGTACGTCG ACCGTCCGCC CCACCACCTC
TCCTTCGGCC AGCGGCGCCG GGTGGCGGTC GCCACGGTGC TCGCGATGGA GCCGGAGATC
CTGGTGCTCG ACGAGCCGTC CTCCAATCTC GACCCGGCGA GCCGGCGCGA GCTCGCCGAC
ATCCTCCGCG CGCTCGACGT GACGGTCCTG ATGGTCACCC ACGACCTGCC CTACGCCCTC
GAGCTGTGCC CGCGCTCGGT GGTGCTCAGC GGGGGCACGG TCGTGGCCGA CGGGTCGACG
TACGACGTCC TCACCGACGC CGAGCTGATG CGCGCCCACC GGCTCGAGCT GCCCTTCGGG
TTCGACCCGC GGACCGTCGC GCCCCGGCCC TGGGGCGGGG CCGGAGCGGT TGATAGCCTC
CAACCGACAC CGACGTCGGA GGAGTACCCG TGA
 
Protein sequence
MSTPVLDVRG LAYAYPDGHQ ALFGVDLHVH RGERVALLGP NGAGKTTLVL HLNGILTAGA 
GTVAVSGLPV EKAHLAEIRR RVGVVFQDPD DQLFMGTVRA DVAFGPANLG LRGPELDRRV
LHALEQVGMA EYVDRPPHHL SFGQRRRVAV ATVLAMEPEI LVLDEPSSNL DPASRRELAD
ILRALDVTVL MVTHDLPYAL ELCPRSVVLS GGTVVADGST YDVLTDAELM RAHRLELPFG
FDPRTVAPRP WGGAGAVDSL QPTPTSEEYP