Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1329 |
Symbol | |
ID | 4598568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1398707 |
End bp | 1399375 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639775924 |
Product | cobalt ABC transporter, inner membrane subunit CbiQ |
Protein accession | YP_922530 |
Protein GI | 119715565 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | [TIGR02454] cobalt ABC transporter, permease protein CbiQ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.378958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGCGCCG GGCACGGCCA CAAGCTGCAC TTCCACGGGC ACTCGGCCGT CCACCGGTCG CCGGCGCACC TGAAGGTCCT GGCGCTGCTC GCGTTCGCGA TCCTCGTGGT CGCGACTCCC CGGCACGTCT ACCCGGCCTT CGCGGCGTAC GCCGTGCTGC TCGTCGTCGT GATCGGCATC AGCCGGGTGC CGCCGACCTA CCTGCTGAAG CGGACCGTCG TCGAGGTCCC GTTCGTCGTC TTCGCCCTGC TGCTGCCGTT CGTCGCGACC GGCCCGCAGA CCGAGGTGCT CGGCGTCGGC GTCAGCCAGC ACGGCCTCGA GGCCGGCGTC GCGCTCCTGG TCAAGGGCAC GCTCGGCGTG CTCGCGAGCC TCACCCTCGC GGCGACCACC GAGCCGCAGG ACCTGCTCGT CGGGCTGGAG CGGCTGCGGG TGCCGCAGCA GCTCGTCCAG ATCATGGCCT TCATGGTCCG CTACCTCGAT GTCGTGACCG GCGAGCTGCA CCGGATGAAG GTCGCCCGGG AGTCGCGGGG GTTCTCCGCC CGCAACCCCA GGCACTGGCC GGTGCTCGCC AGGTCGGCGG GTGCGCTGTT CATCCGCTCC TACGAGCGCG GCGAGCGGGT GCACCTGGCG ATGCTGTCGC GGGGCTACAC GGGCAGAATG CCGCGGTGA
|
Protein sequence | MGAGHGHKLH FHGHSAVHRS PAHLKVLALL AFAILVVATP RHVYPAFAAY AVLLVVVIGI SRVPPTYLLK RTVVEVPFVV FALLLPFVAT GPQTEVLGVG VSQHGLEAGV ALLVKGTLGV LASLTLAATT EPQDLLVGLE RLRVPQQLVQ IMAFMVRYLD VVTGELHRMK VARESRGFSA RNPRHWPVLA RSAGALFIRS YERGERVHLA MLSRGYTGRM PR
|
| |