Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1323 |
Symbol | rph |
ID | 4598561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1395035 |
End bp | 1395763 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639775917 |
Product | ribonuclease PH |
Protein accession | YP_922524 |
Protein GI | 119715559 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCAG CACCACGCGA GGACGGCCGG GCCGACGACG AGCTCCGTCC GATCACGATC ACCCGGCACT GGCTGGACCA CGCCGCCGGG TCGGTCCTGG TGGAGTTCGG CAGGACCAGG GTCCTCTGCG CGGCCTCGGC CGCCGAGGGG GTGCCGCGGT GGCGCAAGGG CTCCGGCCTC GGCTGGGTCA CCGCCGAGTA CGCCATGCTC CCCGCCTCCA CCAACACCCG GTCCGACCGC GAGTCCGTCA AGGGCCGGAT CGGCGGCCGC ACCCACGAGA TCAGCCGCCT GATCGGCCGG TCGCTGCGCG CGATCATCGA CTACAAGGCG CTCGGGGAGA ACACCATCCA GCTCGACTGC GACGTGCTCC AGGCCGACGG CGGTACTCGC ACGGCGGCCA TCACCGGCGC CTACGTCGCG CTCGCCGACG CGGTCGAGCA CCTGCGCTCG ACCGGGGCCC TCACCGGCGA GCCGCTCACC GGCTCCGTGG CCGCGGTCAG CGTCGGGATC ATCGACGGCG TGCCCCGCCT CGACCTGCCC TACGTCGAGG ACGTGCGGGC CGAGACCGAC ATGAACGTCG TGATGACCGG CTCCGGGAAG TTCGTCGAGG TGCAGGGCAC TGCGGAGGGG GCCGCCTTCG ACCGCGCCGA GCTCGACGCG CTGCTGGCCC TGGCGGAGAA GGGGTGCGCC GACCTCACCC GTCTCCAGCA GGAGGCGCTG AGCCGGTGA
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Protein sequence | MSAAPREDGR ADDELRPITI TRHWLDHAAG SVLVEFGRTR VLCAASAAEG VPRWRKGSGL GWVTAEYAML PASTNTRSDR ESVKGRIGGR THEISRLIGR SLRAIIDYKA LGENTIQLDC DVLQADGGTR TAAITGAYVA LADAVEHLRS TGALTGEPLT GSVAAVSVGI IDGVPRLDLP YVEDVRAETD MNVVMTGSGK FVEVQGTAEG AAFDRAELDA LLALAEKGCA DLTRLQQEAL SR
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