Gene Noca_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1323 
Symbolrph 
ID4598561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1395035 
End bp1395763 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content73% 
IMG OID639775917 
Productribonuclease PH 
Protein accessionYP_922524 
Protein GI119715559 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAG CACCACGCGA GGACGGCCGG GCCGACGACG AGCTCCGTCC GATCACGATC 
ACCCGGCACT GGCTGGACCA CGCCGCCGGG TCGGTCCTGG TGGAGTTCGG CAGGACCAGG
GTCCTCTGCG CGGCCTCGGC CGCCGAGGGG GTGCCGCGGT GGCGCAAGGG CTCCGGCCTC
GGCTGGGTCA CCGCCGAGTA CGCCATGCTC CCCGCCTCCA CCAACACCCG GTCCGACCGC
GAGTCCGTCA AGGGCCGGAT CGGCGGCCGC ACCCACGAGA TCAGCCGCCT GATCGGCCGG
TCGCTGCGCG CGATCATCGA CTACAAGGCG CTCGGGGAGA ACACCATCCA GCTCGACTGC
GACGTGCTCC AGGCCGACGG CGGTACTCGC ACGGCGGCCA TCACCGGCGC CTACGTCGCG
CTCGCCGACG CGGTCGAGCA CCTGCGCTCG ACCGGGGCCC TCACCGGCGA GCCGCTCACC
GGCTCCGTGG CCGCGGTCAG CGTCGGGATC ATCGACGGCG TGCCCCGCCT CGACCTGCCC
TACGTCGAGG ACGTGCGGGC CGAGACCGAC ATGAACGTCG TGATGACCGG CTCCGGGAAG
TTCGTCGAGG TGCAGGGCAC TGCGGAGGGG GCCGCCTTCG ACCGCGCCGA GCTCGACGCG
CTGCTGGCCC TGGCGGAGAA GGGGTGCGCC GACCTCACCC GTCTCCAGCA GGAGGCGCTG
AGCCGGTGA
 
Protein sequence
MSAAPREDGR ADDELRPITI TRHWLDHAAG SVLVEFGRTR VLCAASAAEG VPRWRKGSGL 
GWVTAEYAML PASTNTRSDR ESVKGRIGGR THEISRLIGR SLRAIIDYKA LGENTIQLDC
DVLQADGGTR TAAITGAYVA LADAVEHLRS TGALTGEPLT GSVAAVSVGI IDGVPRLDLP
YVEDVRAETD MNVVMTGSGK FVEVQGTAEG AAFDRAELDA LLALAEKGCA DLTRLQQEAL
SR