Gene Noca_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1316 
Symbol 
ID4598554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1388795 
End bp1389565 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content74% 
IMG OID639775910 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_922517 
Protein GI119715552 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGTGA CGATCGTGGG CTGCTCAGGC TCCTACCCGG GCCCGGAGTC GCCGGCCAGC 
TGCTACCTGC TCGAGGCCGA GGACGGCTCC GATCGCACCT GGCGGGTGCT CCTTGACCTC
GGCAACGGGT CGCTCGGCGC GCTGCACCGC TTCGCCGACC CACTCGCCAT CGACGCGGTG
CTGCTCAGCC ACCTGCACGC CGACCACTGC CTGGACCTGT GCGGCTACTA CGTGCTGCGC
AAGTACCACC CGCTCGGCCC GCAGCCGCGG ATCCCGGTGT GGGGCCCGGA GGGCACGGCC
GACCGGATGG CCCGCGCCTA CGACCTGCCG AGTGACCCGG GGATGCACCA CGAGTTCGAG
TTCCACGAGT GGCACGGCGC CGAGCAGATC GGCCCGTTCC GGGTCGAGCC GGTGGCGGTC
AACCACCCGG TCCCGGCGTA CGGGCTGCGG GTCACCGCCG ACGGCATGAC GCTCGCCTAC
ACCGGCGACA CCGGCCCGTG CGCGGCGCTC GACGACCTCG CGCACGACGC GGACCTGTTC
CTCGCCGAGG CCTCGTTCCG TTCCGGCGAC GACAACCCGC CGGACCTGCA CCTCACCGGC
GCCGACGGCG GCGAGGTGGC GGCCCGGGCC GGCGTCCGCC GGCTGGTGCT CACCCATGTC
CCGCCCTGGC ACGACCCGCA GGACGCGGTG GCCGAGGCGG TCGCGTCGTA CGACGGGCCG
GTCGAGCTCG CCCGCCCCGG GACGGTCTAC GACCTGACAA GCGGCTGCTG A
 
Protein sequence
MRVTIVGCSG SYPGPESPAS CYLLEAEDGS DRTWRVLLDL GNGSLGALHR FADPLAIDAV 
LLSHLHADHC LDLCGYYVLR KYHPLGPQPR IPVWGPEGTA DRMARAYDLP SDPGMHHEFE
FHEWHGAEQI GPFRVEPVAV NHPVPAYGLR VTADGMTLAY TGDTGPCAAL DDLAHDADLF
LAEASFRSGD DNPPDLHLTG ADGGEVAARA GVRRLVLTHV PPWHDPQDAV AEAVASYDGP
VELARPGTVY DLTSGC