| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1303 |
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| Symbol | |
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| ID | 4598925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1377044 |
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| End bp | 1378342 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639775897 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_922504 |
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| Protein GI | 119715539 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.313179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGCA CGCGACGCGC GCTGAGCGCG CTGGTTGCGG CTGGTGCCCT CGTGCTCCTG
GCTGCTTGCG GGGGAAGCGA CAGCGAAGGC AACAACGACA CCTCGTCCAA CGGCGACGCC
GCCAGTGGCG AGGTCGAGGT CTTCACCTGG TGGGCCGAGG GCAGCGAGAA GGCCGGCCTC
GACGCGCTGG TGGCGGTCTT CAACGACCAG TACCCGGACA TCAAGTTCGT CAACGGTGCG
GTCGCCGGCG GCGCCGGTAG CGACGCGAAG AACGTGTTGG CCTCCCGGCT GCAGACCAAC
GACCCGCCCG GAACCTTCCA GGCGCACGCG GGCGCGGAGC TGACCGACTA CATCAACAAC
GGGCAGATCG AGGACCTGAC CCAGATGTAC GAGGACAACG GCTGGAACGA CTACTTCCCG
CAGACCCTGC TCGACCGGCT GGAGCAGGAC GGCAAGATCT ACTCCGTCCC GTCCAACATC
CACCGGGCGA ACGTGGTCTG GGCCAACCCG GCCGTGCTGA AGGACGCCGG CGTCGACCCC
GAGGCGACGT ACGCGAGCCT CGACGACTGG ATCTCCGACC TGCAGAAGAT CAAGGCCAAA
GGCTTGATCC CGCTCTCGAT CGCGACCGAC TGGACCCAGG TCCACCTGTT CGAGACCGTG
CTGCTCGCCG ACCTCGGCGC CGACGCCTAC AACGGCCTCT GGGACGGCAC GACCGACTGG
GCCGGCGACG AGGTCGGCGC CGCGCTCGAG GACTACCAGA CCCTGTTCGA GCTCACCAAC
CAGGACCGGC AGTCGCTCGA CTGGCCGGAC GCCACCCAGC TCGTGATCGA CGGCGACGCC
GCGTTCAACG TGATGGGTGA CTGGGCCGTC GCGGCCTTCG AGGAGCAGGG CAAGAAGCTG
GGCACGGACT ACCTGGCCTA CCCGGTGCCC GGCACCGACG GTGTCTTCGA CTTCCTCGCG
GACTCCTTCA CCCTCCCGGT CGGGGCTCCC GACCCCGCCA CCACCGAGGC CTGGCTCTCC
ACCGTGGCCA GCCCCGAGGG TCAGACCGCC TTCAACATGA AGAAGGGCTC GATCCCGGCC
AACACGCAGG CCGACACCTC CGGGTTCGGT GACTACCAGC AGACCGCGAT CGAGTCGTAC
GCCAACGACG ACATCGTCTC GTCGCTGGCC CACGGCGCAG CGGCCCCGAT CAGCTGGCTG
ACCGACATCA CCTCGGCCGT CGCCAAGTAC GGTTCGACCG GTGACCTCGG TGGCTTCCAG
GACGACCTGG CTGCCGCCGC TGAGAAGAAC GCCGGCTGA
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| Protein sequence | MNRTRRALSA LVAAGALVLL AACGGSDSEG NNDTSSNGDA ASGEVEVFTW WAEGSEKAGL
DALVAVFNDQ YPDIKFVNGA VAGGAGSDAK NVLASRLQTN DPPGTFQAHA GAELTDYINN
GQIEDLTQMY EDNGWNDYFP QTLLDRLEQD GKIYSVPSNI HRANVVWANP AVLKDAGVDP
EATYASLDDW ISDLQKIKAK GLIPLSIATD WTQVHLFETV LLADLGADAY NGLWDGTTDW
AGDEVGAALE DYQTLFELTN QDRQSLDWPD ATQLVIDGDA AFNVMGDWAV AAFEEQGKKL
GTDYLAYPVP GTDGVFDFLA DSFTLPVGAP DPATTEAWLS TVASPEGQTA FNMKKGSIPA
NTQADTSGFG DYQQTAIESY ANDDIVSSLA HGAAAPISWL TDITSAVAKY GSTGDLGGFQ
DDLAAAAEKN AG
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