Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1301 |
Symbol | |
ID | 4598923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 1375042 |
End bp | 1375626 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639775895 |
Product | isochorismatase hydrolase |
Protein accession | YP_922502 |
Protein GI | 119715537 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.171639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGT CGAAGCGTGC CCTCGTCGTG ACCGACGTGC AGAACGACTT CTGCGAAGGC GGCTCACTGC CGGTGGCGGG CGGGGCGCGG GTGGCGGCAG ACATCGCCGA GGTCCTGCAC CTGTGGAGCG TGCAGGGGCC CGGGGCGCCC GACTACGCGC ACGTAGTGGC CACCAAGGAC CACCACATAG ATCCGGGCGA GCACTGGTCC CGCGAGCCGG ACTACCTCGA CTCCTGGCCG GTGCACTGCC GGGTGGGGAC CGACGGCGCC TCCTTCCACC CGAACCTCGA CCCCCAGCCG TTCGACGCCA TCTTCTTCAA GGGCGAGCAC CAGGCGGCGT ACTCCGGGTT CGAGGGCCGC ACCGTCGAGG GGGTGGGGCT GGCCGAGTGG CTGCGGTCGC GCGGCGTGAC CGAGGTGGAC GTGTGCGGCA TCGCGACCGA CTACTGCGTG CGCAAGACCG CCCTGGACGC CGTGCGGGAG GGCTTCACGA CGCGGCTCCT CGCCGACCTG TGCGCGGGCG TGGCCCCGGA CACCTCGGCC GCGGCGCTCG AGGAGATGCG GGCCGCCGGG GTGAGCGTTG CCTGA
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Protein sequence | MSESKRALVV TDVQNDFCEG GSLPVAGGAR VAADIAEVLH LWSVQGPGAP DYAHVVATKD HHIDPGEHWS REPDYLDSWP VHCRVGTDGA SFHPNLDPQP FDAIFFKGEH QAAYSGFEGR TVEGVGLAEW LRSRGVTEVD VCGIATDYCV RKTALDAVRE GFTTRLLADL CAGVAPDTSA AALEEMRAAG VSVA
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