| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1295 |
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| Symbol | |
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| ID | 4598917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1368677 |
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| End bp | 1369870 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639775889 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_922496 |
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| Protein GI | 119715531 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.498463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTGA CACCGGACGA GCTCAAGGCC GACCTGACCC TCGACCAGCT CAAGGAGCTG
GTCGGCCTCG TGGAGTACGA CGCCGCCAAC GACCCCTTCC CGGTGATCGC CCAGGACGCC
GTCTGCTTCG TGGTCGGCAA CGCCACCCAG ACCGCGTCCT TCTACCAGCT CGCGCTCGGG
ATGGAGCTCG AGGCCTACCG TGGCCCGGAG AACGGGTGTC GCGAGTCCAA GTCCTACGTG
CTGCGCTCGG GCAGCGCCCG GTTCGTCTTC ACCGGCGGGG TCACCCCGGA CAGCCCGGTG
CTCGACCACC ACCGCAGGCA CGGCGACGGG GTCGTCGACC TGGCGATGGA GGTGCCCGAC
GTCGACCGGT GCATCGAGCA CGCCCGGGCG ATGGGCGCCA CGATCCTGGT GGAGCCCCAC
GACGAGACCG ACGAGCACGG CACGGCCCGG CTCGCCGCGA TCGCGACGTA CGGCGAGACC
CGCCACACCC TGGTCGACCG CTCGCGCTAC TCCGGCCCCT ACCTGCCCGG CTACGCGCCG
GCCACGACCA CGGTGACCCG CCGCGAGGGC CGGCCCAAGC GCCTGTTCCA GGCGATCGAC
CACTGCGTCG GGAACGTCGA GCTCGGCCGC ATGGACGAGT GGGTGACGTT CTACAACAGG
GTGCTCGGCT TCACGAACAT GGCCGAGTTC ATCGGCGACG ACATCGCGAC CGACTACTCC
GCGCTGATGT CCAAGGTCGT CGCGAGCGGC AACCACCGGG TGAAGTTCCC GCTCAACGAG
CCCGCCGTGG CGAAGAAGAA GTCCCAGATC GACGAGTACC TCGAGTTCTA CGACGGTGCC
GGCTGCCAGC ACATCGCGCT GGCGACCAAC GACATCCTGC GCAGCGTCGA CGTCCTGCGC
GAGAACGGCA TCCAGTTCCT CGACACCCCG GACTCCTACT ACGACGACCC CGAGCTGCGC
GCCCGGATCG GCGAGGTGCG GGTGCCGATC GAGGAGCTGA AGAAGCGCAA GATCCTCGTC
GACCGCGACG AGGACGGCTA CCTGCTGCAG ATCTTCACCA AGCCGATGGG GGACCGGCCG
ACGGTCTTCT ACGAGTTCAT CGAACGGCAC GGCTCGCTCG GCTTCGGCAA GGGCAACTTC
AAGGCGCTGT TCGAGGCGAT CGAGCGCGAG CAGGAGCTCC GCGGCAACCT CTGA
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| Protein sequence | MTLTPDELKA DLTLDQLKEL VGLVEYDAAN DPFPVIAQDA VCFVVGNATQ TASFYQLALG
MELEAYRGPE NGCRESKSYV LRSGSARFVF TGGVTPDSPV LDHHRRHGDG VVDLAMEVPD
VDRCIEHARA MGATILVEPH DETDEHGTAR LAAIATYGET RHTLVDRSRY SGPYLPGYAP
ATTTVTRREG RPKRLFQAID HCVGNVELGR MDEWVTFYNR VLGFTNMAEF IGDDIATDYS
ALMSKVVASG NHRVKFPLNE PAVAKKKSQI DEYLEFYDGA GCQHIALATN DILRSVDVLR
ENGIQFLDTP DSYYDDPELR ARIGEVRVPI EELKKRKILV DRDEDGYLLQ IFTKPMGDRP
TVFYEFIERH GSLGFGKGNF KALFEAIERE QELRGNL
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