| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1285 |
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| Symbol | |
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| ID | 4598907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1359498 |
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| End bp | 1360265 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639775879 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_922486 |
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| Protein GI | 119715521 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCGTT TTGACGGACG CGTCGTCGTC GTCACCGGAG CCGCGCGCGG CATCGGGTTC
GGGACCGCCA CCCGCTTCGC CGAGGAGGGC GCCTCGGTCG CCGTCCTCGA CCTGGACGAG
GCCTCCGCGG CCGAGGCGGC CGCCAAGCTG CCGGTCAGCG GCGGCGCGAA GGCCGTCGGC
ATCGGCTGCG ACGTCAGCGA CAGCGCGGCC GCGGAGGCCG CCGTCGAGCG GGTCGTCGCC
GAGCTGGGCG GCATCCACGT GCTGGTCAAC AACGCCGGCA TCACCCGCGA CAACCTGCTG
TTCAAGATGA CCGAGGACGA CTGGGACCTG GTCATGAACG TGCACCTGCG GGGCGCGTTC
CTCATGACCC GGGCGGCGCA GAAGCACTTC GTCGCCCAGA AGTACGGCAA GATCCTCAAC
CTCTCGAGCG TCTCCGCCCT CGGCAACCGG GGCCAGGCCA ACTACTCCGC GGCCAAGATG
GGCATCCAGG GCCTCACCCG CACGCTCGGC ATCGAGCTGG GCCCGTTCGG CATCAACGCG
AACGCGATCG CCCCGGGCTT CATCGCCACC GAGATGACCG ACGCCACCGC GGCCCGGCTC
AAGATGGACG TCGATGAGTT CCGCAAGCTC AACGCCGAGG CCAACCCGGT GCGCCGCGTG
GGCTACCCGG AGGACATCGC GGCCGCCGCG GCCTTCCTGT GCAGCGACGA GGCGTCGTAC
ATCACCGGCC AGACCCTGTA CGTCGACGGC GGCGCCAAGC TCGGCTAG
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| Protein sequence | MGRFDGRVVV VTGAARGIGF GTATRFAEEG ASVAVLDLDE ASAAEAAAKL PVSGGAKAVG
IGCDVSDSAA AEAAVERVVA ELGGIHVLVN NAGITRDNLL FKMTEDDWDL VMNVHLRGAF
LMTRAAQKHF VAQKYGKILN LSSVSALGNR GQANYSAAKM GIQGLTRTLG IELGPFGINA
NAIAPGFIAT EMTDATAARL KMDVDEFRKL NAEANPVRRV GYPEDIAAAA AFLCSDEASY
ITGQTLYVDG GAKLG
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