Gene Noca_1272 details

Gene Information

• Locus tag: Noca_1272
• Symbol: smpB
• ID: 4598893
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1347172
• End bp: 1347651
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639775866
• Product: SsrA-binding protein
• Protein accession: YP_922473
• Protein GI: 119715508
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.352347
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAGG AGCAGGGGCG CAAGCTGATC GCGCAGAACA AGAAGGCGCG GCACGACTAC 
CACATCGAGG ACACCTACGA GGCCGGCCTG GTCCTCCAGG GCACCGAGGT GAAGTCGCTG 
CGGCAGGGCC GGGCGTCCCT CGTCGACGGC TTCGTGGACA TCGACCGCGG CGAGGCCTGG 
CTGCACGGCG TGCACATCCC GGAGTACTCC CAGGGCACCT GGACCAACCA CGCCGCGCGC 
CGCAAGCGCA AGCTGCTGCT CAACCGCGAC GAGATCGACA AGATCGAGCG TCGGGTCAAC 
GAGAAGGGCC TCACGGTCGT CCCGCTCGCC CTGTACTTCA AGGACGGCCG GGCCAAGGTC 
GAGATCGCGC TCGCCAAGGG CAAGAAGTCG TGGGACAAGC GGGCCGCGCT CGCCGAGCGG 
CAGGCCAACC GGGAGACCGA GCAGGCGGTC GGCCGCCGGC TCAAGGGCAT GCATGACTGA 

 

Protein sequence

MAKEQGRKLI AQNKKARHDY HIEDTYEAGL VLQGTEVKSL RQGRASLVDG FVDIDRGEAW 
LHGVHIPEYS QGTWTNHAAR RKRKLLLNRD EIDKIERRVN EKGLTVVPLA LYFKDGRAKV 
EIALAKGKKS WDKRAALAER QANRETEQAV GRRLKGMHD