Gene Noca_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1243 
Symbol 
ID4599239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1318861 
End bp1319370 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content71% 
IMG OID639775837 
ProductNLP/P60 protein 
Protein accessionYP_922444 
Protein GI119715479 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.215255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTCA TCCTGCGCGC GCTCGCGAGC GCCGCCCTCG TCGTCGGCCT GCTGACCACG 
GCGCCCGCCG TCCCTGACGC ACACGGCGCG ACCGCGGCCC GGGAGACCAA GCACCGGACC
GCTCGCCAGG CCACGGCTCG CAAGATCGGC CACGCGATCA GCATCGCGGT CAACCAGAAG
GGCGACCCCT ACCGGTCCGG AGCCGCCGGC CCGCACGCGT TCGACTGCTC CGGGCTGACC
TTCTTCAGCT ACCGCAAGGC CGGCTTCAAA CACCTGCCCC GGACGTCCTC CGCCCAGGCC
CACTTCGCGA AGCGGATCAA GCGCGGCGCG ATGCGTCGCG GCGACCTGAT CTTCTTCTAC
GACGGCGGCG GCGTCTACCA CGTCGGCGTG TACGCCGGCT TCAACCACGG GCACCGCTGG
GTGCTGCACT CGCCGTACTC CGGCACCCGC GTGCGCACCG ACAAGCTGTG GACCGACCGG
TGGTTCGCCG GCACCCTGCG CTACCGCTGA
 
Protein sequence
MTLILRALAS AALVVGLLTT APAVPDAHGA TAARETKHRT ARQATARKIG HAISIAVNQK 
GDPYRSGAAG PHAFDCSGLT FFSYRKAGFK HLPRTSSAQA HFAKRIKRGA MRRGDLIFFY
DGGGVYHVGV YAGFNHGHRW VLHSPYSGTR VRTDKLWTDR WFAGTLRYR