Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1243 |
Symbol | |
ID | 4599239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1318861 |
End bp | 1319370 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639775837 |
Product | NLP/P60 protein |
Protein accession | YP_922444 |
Protein GI | 119715479 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.215255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTCA TCCTGCGCGC GCTCGCGAGC GCCGCCCTCG TCGTCGGCCT GCTGACCACG GCGCCCGCCG TCCCTGACGC ACACGGCGCG ACCGCGGCCC GGGAGACCAA GCACCGGACC GCTCGCCAGG CCACGGCTCG CAAGATCGGC CACGCGATCA GCATCGCGGT CAACCAGAAG GGCGACCCCT ACCGGTCCGG AGCCGCCGGC CCGCACGCGT TCGACTGCTC CGGGCTGACC TTCTTCAGCT ACCGCAAGGC CGGCTTCAAA CACCTGCCCC GGACGTCCTC CGCCCAGGCC CACTTCGCGA AGCGGATCAA GCGCGGCGCG ATGCGTCGCG GCGACCTGAT CTTCTTCTAC GACGGCGGCG GCGTCTACCA CGTCGGCGTG TACGCCGGCT TCAACCACGG GCACCGCTGG GTGCTGCACT CGCCGTACTC CGGCACCCGC GTGCGCACCG ACAAGCTGTG GACCGACCGG TGGTTCGCCG GCACCCTGCG CTACCGCTGA
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Protein sequence | MTLILRALAS AALVVGLLTT APAVPDAHGA TAARETKHRT ARQATARKIG HAISIAVNQK GDPYRSGAAG PHAFDCSGLT FFSYRKAGFK HLPRTSSAQA HFAKRIKRGA MRRGDLIFFY DGGGVYHVGV YAGFNHGHRW VLHSPYSGTR VRTDKLWTDR WFAGTLRYR
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