Gene Noca_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1240 
Symbol 
ID4599236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1315692 
End bp1316396 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content71% 
IMG OID639775834 
Productresponse regulator receiver 
Protein accessionYP_922441 
Protein GI119715476 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGCTC CCATGGCGCA ACGAGTTCTG GTGGTCGAGG ACGAGGAGGA CATCGCGTTC 
CCCCTCGTCC GAACGCTGGA GCGCGAAGGT TACGACGTCT CGTGGGTGGA CAGCGGCCAG
AAGGCCCTGG ACACCATGGC GACCGCACCC GAGGTCGTGA TCCTCGACCT CGGGCTCCCG
GACATCGACG GCCTCGAGGT GTGCCGCCGG GCCCGGGAGG CGGGGTTCGA GGGCGCGATC
ATGATCGTCA CCGCCCGGGC GGGCGAGCTG GACCGGGTGG TCGGGCTCGA CTACGGGGCC
GACGACTACC TGGCCAAGCC GTTCGGCCTG GCCGAGCTGC AGGCGCGCGT GCGCGCCCTG
TTGCGCCGTA CCTCCTCCGG CTCGGCCACG GCCGAGGGCG CGAAGCCCGA CGGGCTGCGC
ATCGACGTGG ACGCCCGGCG GGTCTACGCC GGCGACGAGG AGGTCCCGCT CACCGGCAAG
GAGTTCGAGG TGTTGAACAT CCTCGCCGCC AACCGGGACA AGGTCGTCTC GCGCGGCCGG
CTGATGGCCG ACGTGTGGGA CGAGAACTGG TACGGCTCGA CGAAGACGCT CGACGTCACC
ATCGGACGGC TGCGCCAGAA GCTCGAGAGC GTCGGCGTGA CCGACAGGGT GGTGGCCGTT
CGAGGTGTGG GGTTCCGCCT CGAGGGCGGC ACCCCAGATG CGTGA
 
Protein sequence
MLAPMAQRVL VVEDEEDIAF PLVRTLEREG YDVSWVDSGQ KALDTMATAP EVVILDLGLP 
DIDGLEVCRR AREAGFEGAI MIVTARAGEL DRVVGLDYGA DDYLAKPFGL AELQARVRAL
LRRTSSGSAT AEGAKPDGLR IDVDARRVYA GDEEVPLTGK EFEVLNILAA NRDKVVSRGR
LMADVWDENW YGSTKTLDVT IGRLRQKLES VGVTDRVVAV RGVGFRLEGG TPDA