Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1220 |
Symbol | |
ID | 4599269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1292731 |
End bp | 1294377 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639775814 |
Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_922421 |
Protein GI | 119715456 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATACGC TCGCAGGCAT GGACGCTGTG ACCCACCCCC CGGCTCCGGT CAACGAGCCG AACCTGACCT ACGCACCCGG CACTCCCGAG CGGGAGTCGC TGCTGGTCGA GATCGAGCGG CTCGAGAAGA GACAGAAGAG CCTGCGGGCC TACATCGGCG GGCGGTGGAA GGCCGGGGGC GGCGCGGAGG TCGCGGTGGT GCAGCCGCAC GACCACCAGC ACGTGCTCGG GGTGCTGAAG AACGCCACCC AGGCCGACGC GCGGGCGGCG GTGAAGGCTG CGGGCGAGGC GGCGCCACAG TGGCGGGCGA TGGACTTCGA CGACCGGGCA GCCATCCTGC TCAAGGCCGC GGAGCTCCTG GCCGGGCCGT GGCGCCAGCG GCTGAACGCC GCGACGGTGC TGGGGCAGTC CAAGACGCCG TTCCAGGCGG AGATCGACGC GGCGTGCGAG CTGATCGACT TCTGGCGCTA CAACGTGCAC TACGCGCGGG AGATCCTGGC CGACCAGCCG ATCGCGAACA GCCGGGGGAT CTGGAACCGG ACCGACCACC GGCCCCTGGA GGGGTTCGTC TACGCGATCA CGCCGTTCAA CTTCACCGCG ATCGCGGGCA ACCTGCCCAC GGCGCCGGCG TTGATGGGCA ACACGGTGAT CTGGAAGCCC TCGCCGACCC AGCAGCTGGC CGCGTCGTTG ACCATGGAGC TGCTCGAGGA GGCCGGCCTG CCGCCCGGCG TGATCAACAT GCTTCCCGGC GACGGCATCG ACGTCTCCGC GGTGGCGCTG GCCCACCCGG ACCTGGCCGG GATCCACTTC ACCGGCTCCA CCCCGACCTT CCAGCACCTG TGGCGCGAGG TCGGCAACAA CATCGAGAAC TACCGGTCCT ACCCGCGGAT CGTGGGGGAG ACCGGCGGCA AGGACTTCAT CGTCGCCCAT GCCTCGGCCG ACCCCGACGT GCTGCGCACC GCGATGATCC GCGGCGCCTT CGAGTTCCAG GGTCAGAAGT GCTCGGCCGC CTCTCGCGCG TACGTCGCCC GGTCGGTGTG GACCAGGATG AAGGACTCCT TCCTCGCCGA GATCGAGTCG ATCACCGTCG GGGACCCCAC CGACTTCTCC AACTTCATGG GCGCGGTCAT CGACGAGCGA GCCTTCGCCA AGCACCGGAA GGCGATCGAG CGGGCCAAGC GGTCCCGCAA GCTCGACATC GTGGTGGGTG GCACCCTCGA CGACTCGGCC GGCTGGTTCG TGGACCCGAC CGTGGTCGAG GGCGGGGACC CGACCGACGA GATGTTCACG ACCGAGTACT TCGGCCCGAT CCTCGCGGTG CATGTCTTCG AGGACGGCGA CTTCGAGAAG GTCGTTCGGG GCATGGAGTC GATCGCCCCT TACGCGCTGA CCGGGTCCGT CATCGCCCAG GACCGCCGCG CGATCGCCTG GGCCCAGGAC GAGCTCCGCT TCGCCGCCGG CAACTTCTAC ATCAACGACA AGCCCACTGG CGCCGTCGTG GGCCAACAGC CCTTCGGGGG TGGCCGCGCG TCCGGCACCA ACGACAAGGC CGGCGCGGCG GTCAACCTCC TGCGCTGGAC GTCGCCGCGC TCGATCAAGG AGACTTTCGT TCCGCCGACC GACTACCGCT ACCCCTACTT GGGCTGA
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Protein sequence | MDTLAGMDAV THPPAPVNEP NLTYAPGTPE RESLLVEIER LEKRQKSLRA YIGGRWKAGG GAEVAVVQPH DHQHVLGVLK NATQADARAA VKAAGEAAPQ WRAMDFDDRA AILLKAAELL AGPWRQRLNA ATVLGQSKTP FQAEIDAACE LIDFWRYNVH YAREILADQP IANSRGIWNR TDHRPLEGFV YAITPFNFTA IAGNLPTAPA LMGNTVIWKP SPTQQLAASL TMELLEEAGL PPGVINMLPG DGIDVSAVAL AHPDLAGIHF TGSTPTFQHL WREVGNNIEN YRSYPRIVGE TGGKDFIVAH ASADPDVLRT AMIRGAFEFQ GQKCSAASRA YVARSVWTRM KDSFLAEIES ITVGDPTDFS NFMGAVIDER AFAKHRKAIE RAKRSRKLDI VVGGTLDDSA GWFVDPTVVE GGDPTDEMFT TEYFGPILAV HVFEDGDFEK VVRGMESIAP YALTGSVIAQ DRRAIAWAQD ELRFAAGNFY INDKPTGAVV GQQPFGGGRA SGTNDKAGAA VNLLRWTSPR SIKETFVPPT DYRYPYLG
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