| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1210 |
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| Symbol | |
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| ID | 4599310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1283940 |
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| End bp | 1284632 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639775804 |
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| Product | RNA polymerase sigma factor SigE |
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| Protein accession | YP_922411 |
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| Protein GI | 119715446 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.380405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGGAAGG ACAAGACCCT GTTCCCCCAG GCACGCAAGC GCCAGCAGCC CCTCCAGGAG
GCACCCATGG ACACGCCGGT GACCCCCGCT GCGGGCGGTC CTGCCGACCG ACCGGCCGAG
GGCGTCCCGT CCTGGGAGGA GATCGTCGAG CAGCACTCCG ACCGGGTGTT CCGGCTGGCC
TACCGTCTGA CCGGCAACCG CCACGACGCC GAGGACCTCA CCCAGGAGGT CTTCGTCCGG
GTGTTCCGTT CGCTGTCCAC CTACACCCCC GGCACCTTCG AGGGCTGGCT GCACCGCATC
ACCACGAACC TCTTCCTCGA CCAGGCCCGG CGCAAGCAGC GGATCCGCTT CGACGCCCTC
TCCGACGAGC GCGCCGACCG GCTCACCAGC TCCTCGCCGA GCCCGGATGC GGCGTACGCC
GACCGCACCT TCGACGACGA CATCGAGCGT GCCCTCGCGA CCCTGCCGCC GGACTTCCGC
GCCGCGGTCG TCCTCTGCGA CGTCGAGGGG CTCGCCTACG AGGAGATCGC CGAGATCCTG
GGCGCCAAGC TCGGCACCGT CCGCTCCCGC ATCCACCGCG GCCGCGCCAT GCTGCGCTCC
GCCCTCGCGC ACCGGGCGCC GAGCGCCGGC CGGGTGCGGT ACGCCGGTCC CGCGGCCGGG
CCGCTGCTCT CGGGCTGGGG GTCCGCGACG TGA
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| Protein sequence | MRKDKTLFPQ ARKRQQPLQE APMDTPVTPA AGGPADRPAE GVPSWEEIVE QHSDRVFRLA
YRLTGNRHDA EDLTQEVFVR VFRSLSTYTP GTFEGWLHRI TTNLFLDQAR RKQRIRFDAL
SDERADRLTS SSPSPDAAYA DRTFDDDIER ALATLPPDFR AAVVLCDVEG LAYEEIAEIL
GAKLGTVRSR IHRGRAMLRS ALAHRAPSAG RVRYAGPAAG PLLSGWGSAT
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