Gene Noca_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1189 
Symbol 
ID4599289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1262969 
End bp1264243 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content74% 
IMG OID639775783 
Productaspartyl-tRNA synthetase 
Protein accessionYP_922390 
Protein GI119715425 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0017] Aspartyl/asparaginyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.384955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCGCA CGCTCTGTTC CGACCTGCCC GCCGCGACGC CCGGCTCGAC CGTGCGGCTC 
CAAGGCTGGG TGCACCGGCG TCGTGAGCTG TCCGCGCTGA CCTTCCTGGT GGTCCGCGAC
CGCAGCGGCC TGGCCCAGGT CGTGGTCCGC GACGGCTCGG CCGTGCCGCC CGAGGAGACG
ACCGTCGAGG TGGTCGGCAC CGCGACCGCG AACGCCCAGG CGCCGGGCGG GATGGAGCTG
ACCGACCCGG TCGTCACCGC GCTGACCGAG CCGGCCGCGA CCCCACCGGT GGAGCTGTGG
CGCCCCGGCC TGGACGTCGT GCTGCCGACC CTGCTCGACC ACGCGCCGGT GACCTGGCGA
CACCCGCGGC AGCGGGCCCG GTGGGAGCTG GCCGCGGCGT CGGTCCGGGG CTTCCGCGCG
ACCCTCGACG CCGCCGGCTT CACCGAGGTC CAGACCCCGA AGTTCGTGGC GTCGGCGACC
GAGTCGGGGG CGAACGTGTT CGAGGTCGAC TACTTCGGGC GGCCGGCGTA CCTGGCCCAG
AGCCCGCAGT TCTACAAGCA GCAGCTGGTC GGCGTCTTCG AGCGGGTCTA CGAGGTCGGC
CCGGTGTTCC GCGCCGAGCC GCACGACACG GTGCGGCACC TGGCGGAGTA CGTCTCGCTC
GACGTCGAGC TCGGCTTCGT CCGCGACCAC CGCGACGTGC TGTCGGTGCT GCGCGACGTG
CTCGCCGGGA TGGTCGCGGC GGTGCACGAG CACGTCGGCG CCGCGGTGGA ACGGTCCGGC
GCGGCGATAC CGGTCGTTCC CGAGGAGATC CCGGTCCTGC ACTTCCGCGA CGCGCTGGCA
CTGGTCGGTG CCCCCGAGGA CGAGCCCGAC CTGGCGCCCG AGCACGAGCG GGCGATCGGC
GCCTGGGCGC TCACCGAGCA CGGCAGCGAC TTCGTGGCCG TCGAGGGCTA CCCGATGGCG
AAGCGACCGT TCTACACGCA CCCGTGGCCG GGCGAGGAGA GGTGGTCGAA CAGCTTCGAC
CTGCTGTTCC GCGGGCTCGA GCTGGTCACC GGGGGGCAGC GCCTGCACCG GCCCTCGGAG
TACGACGCCG CGATCCGCGC CCGGGGCGAG GACCCGGCGG CGTACGCGCC GTACCTCCAG
GCCTTCGAGC ACGGCATGCC GCCGCACGGC GGGTTCGCGA TTGGCCTGGA GCGGTGGACG
GCCCGGCTCA CCGGGGTCGC GAACATCCGC GAGGTGACGC TGTTCCCGCG CGACCTGACC
CGGCTGACCC CCTGA
 
Protein sequence
MHRTLCSDLP AATPGSTVRL QGWVHRRREL SALTFLVVRD RSGLAQVVVR DGSAVPPEET 
TVEVVGTATA NAQAPGGMEL TDPVVTALTE PAATPPVELW RPGLDVVLPT LLDHAPVTWR
HPRQRARWEL AAASVRGFRA TLDAAGFTEV QTPKFVASAT ESGANVFEVD YFGRPAYLAQ
SPQFYKQQLV GVFERVYEVG PVFRAEPHDT VRHLAEYVSL DVELGFVRDH RDVLSVLRDV
LAGMVAAVHE HVGAAVERSG AAIPVVPEEI PVLHFRDALA LVGAPEDEPD LAPEHERAIG
AWALTEHGSD FVAVEGYPMA KRPFYTHPWP GEERWSNSFD LLFRGLELVT GGQRLHRPSE
YDAAIRARGE DPAAYAPYLQ AFEHGMPPHG GFAIGLERWT ARLTGVANIR EVTLFPRDLT
RLTP