Gene Noca_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1186 
Symbol 
ID4599286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1260194 
End bp1261036 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content70% 
IMG OID639775780 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_922387 
Protein GI119715422 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.218378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGTACG TGACCTACGA GTCTCCGGAA GGCCGCGGTC GCCGGGTCGG GTACCTCGAC 
GGCGACGCCG TGGTCGATGC CGGGTTCGAC GGCGACATGG TCGCGTTCAT CGAGGCCGGG
GCACCGGTCG GGACCACCCG GGGTGTCGCG AACGCGGTGC TGCGGGCACC CTTGCGGCCA
CGCACGCTGC GTGACTTCCT CGCCTTCGAG GGCCATCTAC TCAACGTCTT CCCGGCCCTC
GGCAAGGCGA TACCGGAGGA GTGGTACCGG CTTCCGGCCT ACTACAAGGG ACTACCGGAC
ACCGTGATCG GACCGGAGGA CGAGATCCCG TGGCCGGCGT ACACCCAGCG GCTCGACCAC
GAGCTCGAGC TCGCCGCGGT CATCGGCCGT CCGGGGAAGG ACATCACCGA GGACAACGCC
CTCGACCACG TCTTCGGCTA CACGATCTGG AACGACCTCT CCGCGCGTGA CGTCCAGGCG
GGCGAGCTGC CGGTGGGGAT GGGTCCGGGC AAGGCGAAGG ACTGGGACGG CTCGAACGTC
CTCGGCCCCT GCATCGTCAC CGCCGACGAG GTCGACCCGC ACGACATCGA GCTCGAGGTC
CGCGTCAACG GCGAGCGTTG GGGCGGCGCC AACACCCGGG ACATGCACCA TACGTTCGAG
TCGATGATCG TCTACGCATC CCAGGCGCTG ATGCTCCGAC CCGGCGAGGT GCTCGGCTCC
GGCACGGCCA CCGGGGGCAG CGGCGTGGAG CTGGGTCGCT GGCTCGCCCC CGCCGACACG
GTCGAGATGG AGGCCTCCGG CATCGGAGTA CTCCGCAACG TCGTCGGGCA CCGACCGGCC
TGA
 
Protein sequence
MRYVTYESPE GRGRRVGYLD GDAVVDAGFD GDMVAFIEAG APVGTTRGVA NAVLRAPLRP 
RTLRDFLAFE GHLLNVFPAL GKAIPEEWYR LPAYYKGLPD TVIGPEDEIP WPAYTQRLDH
ELELAAVIGR PGKDITEDNA LDHVFGYTIW NDLSARDVQA GELPVGMGPG KAKDWDGSNV
LGPCIVTADE VDPHDIELEV RVNGERWGGA NTRDMHHTFE SMIVYASQAL MLRPGEVLGS
GTATGGSGVE LGRWLAPADT VEMEASGIGV LRNVVGHRPA